Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34015

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,061,042	+				+0.8
3,061,058	+				-0.8
3,061,058	+				-0.5
3,061,090	-				-0.9
3,061,095	+				-0.7
3,061,095	+				+0.5
3,061,095	+				+1.1
3,061,096	-				+0.3
3,061,096	-				-0.2
3,061,096	-				-0.3
3,061,099	+				+0.1
3,061,099	+				+0.6
3,061,099	+				-0.5
3,061,099	+				+1.6
3,061,099	+				+0.1
3,061,099	+				+0.2
3,061,099	+				+0.8
3,061,100	-				-0.7
3,061,100	-				-0.7
3,061,100	-				+0.1
3,061,100	-				+0.8
3,061,100	-				-0.5
3,061,100	-				+0.7
3,061,101	+				+0.8
3,061,101	+				-1.3
3,061,101	+				-0.1
3,061,102	-				-0.4
3,061,126	+				-1.0
3,061,126	+				+1.2
3,061,127	-				-0.9
3,061,127	-				+0.1
3,061,131	-				-0.1
3,061,139	+				+1.0
3,061,139	+				-2.0
3,061,139	+				+1.6
3,061,139	+				+0.2
3,061,140	-				-0.2
3,061,140	-				+0.1
3,061,164	-				+0.3
3,061,177	-				+0.4
3,061,212	+				+0.3
3,061,212	+				-1.5
3,061,213	-				+0.4
3,061,213	-				-0.5
3,061,213	-				-0.4
3,061,273	+				-1.0
3,061,273	+				+0.7
3,061,273	+				-1.2
3,061,274	-				-1.3
3,061,274	-				+1.1
3,061,321	+				-0.3
3,061,321	+				+1.3
3,061,322	-				-0.5
3,061,322	-				+0.6
3,061,322	-				-1.2
3,061,322	-				-0.6
3,061,408	+				+0.2
3,061,409	-				-1.5
3,061,530	+				-0.9
3,061,530	+				+0.8
3,061,620	-				+0.1
3,061,620	-				+0.7
3,061,620	-				+0.4
3,061,620	-				-1.6
3,061,620	-				+0.4
3,061,620	-				+0.0
3,061,620	-				-0.1
3,061,623	+				-1.8
3,061,623	+				-1.5
3,061,623	+				-0.3
3,061,623	+				-0.0
3,061,624	-				+1.3
3,061,624	-				+0.7
3,061,624	-				-0.7
3,061,624	-				+0.4
3,061,624	-				-0.9
3,061,624	-				-0.3
3,061,637	+				-0.0
3,061,637	+				+0.1
3,061,638	-				+0.2
3,061,638	-				+0.6
3,061,825	-				+0.1
3,061,865	+				+0.1
3,061,865	+				-1.0
3,061,865	+				+0.1
3,061,866	-				+0.1
3,061,866	-				-0.1
3,061,867	+				-0.4
3,061,867	+				+2.8
3,061,868	-				-0.6
3,061,868	-				+0.0
3,061,872	-				-2.6
3,062,033	+		RR42_RS34015	0.10	-0.7
3,062,144	-		RR42_RS34015	0.20	+1.2
3,062,239	-		RR42_RS34015	0.28	-2.7
3,062,494	+		RR42_RS34015	0.50	-0.3
3,062,563	-		RR42_RS34015	0.56	+3.1
3,062,563	-		RR42_RS34015	0.56	+0.2
3,062,563	-		RR42_RS34015	0.56	-0.9
3,062,614	-		RR42_RS34015	0.61	+0.2
3,062,653	+		RR42_RS34015	0.64	+0.1
3,062,654	-		RR42_RS34015	0.64	-0.0
3,062,654	-		RR42_RS34015	0.64	-1.2
3,062,751	+		RR42_RS34015	0.73	+1.3
3,062,805	+		RR42_RS34015	0.78	-0.5
3,062,805	+		RR42_RS34015	0.78	-0.5
3,062,812	+		RR42_RS34015	0.78	+0.3
3,062,878	+		RR42_RS34015	0.84	+0.3
3,062,879	-		RR42_RS34015	0.84	-0.3
3,063,079	+				+0.1
3,063,079	+				+0.7
3,063,079	+				-1.0
3,063,079	+				-1.6
3,063,154	+				-2.0
3,063,168	+				+1.0
3,063,169	-				+0.4
3,063,169	-				+0.7
3,063,172	+				-1.6
3,063,173	-				-2.3
3,063,173	-				+0.5
3,063,188	+				-1.2
3,063,189	-				+0.8
3,063,204	+				+0.4
3,063,204	+				+0.4
3,063,205	-				-0.7
3,063,205	-				-1.2
3,063,205	-				+0.4
3,063,205	-				-1.5
3,063,205	-				+0.0
3,063,246	+				+0.1
3,063,430	-		RR42_RS34020	0.46	+0.7
3,063,430	-		RR42_RS34020	0.46	+1.4
3,063,484	+		RR42_RS34020	0.58	-0.9
3,063,484	+		RR42_RS34020	0.58	-1.0
3,063,553	+		RR42_RS34020	0.73	+0.2
3,063,554	-		RR42_RS34020	0.73	+0.3
3,063,595	-		RR42_RS34020	0.82	+1.2
3,063,792	+				+0.8
3,063,792	+				+0.4
3,063,793	-				+0.5
3,063,835	-				+0.4
3,064,040	-				+0.5