Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33985

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,051,738	+				-0.5
3,051,754	+				-0.5
3,051,754	+				+1.4
3,051,785	-				-0.2
3,051,800	+				-0.2
3,051,809	-				-0.7
3,051,832	-				-1.0
3,051,901	+				+1.8
3,051,901	+				-0.1
3,051,949	+				-0.1
3,051,985	+				+0.8
3,051,985	+				+0.3
3,051,985	+				+1.6
3,051,986	-				+0.7
3,051,986	-				-0.8
3,051,986	-				-0.6
3,052,005	+				-1.6
3,052,005	+				-2.2
3,052,021	+				+1.0
3,052,021	+				+0.6
3,052,021	+				+0.2
3,052,021	+				-0.8
3,052,022	-				-0.7
3,052,022	-				-0.9
3,052,078	-				-0.1
3,052,087	-				-1.8
3,052,087	-				-2.0
3,052,089	+				-0.2
3,052,089	+				-0.3
3,052,089	+				-2.2
3,052,090	-				+0.4
3,052,090	-				+0.7
3,052,095	-				+0.7
3,052,112	-				+0.3
3,052,140	+				+0.9
3,052,141	-				+0.2
3,052,168	+				+0.8
3,052,168	+				-0.3
3,052,169	-				-0.7
3,052,206	+				+1.0
3,052,207	-				+1.6
3,052,279	-				+1.2
3,052,279	-				-1.8
3,052,363	-				-0.2
3,052,474	-				-1.3
3,052,474	-				-0.3
3,052,538	+				+0.6
3,052,553	+				+0.9
3,052,602	+		RR42_RS33985	0.12	+0.9
3,052,636	-		RR42_RS33985	0.19	+1.6
3,052,636	-		RR42_RS33985	0.19	+0.3
3,052,716	+		RR42_RS33985	0.38	-0.1
3,052,717	-		RR42_RS33985	0.38	+0.3
3,052,717	-		RR42_RS33985	0.38	+0.3
3,052,717	-		RR42_RS33985	0.38	-0.4
3,052,732	+		RR42_RS33985	0.42	+1.1
3,052,732	+		RR42_RS33985	0.42	+1.0
3,052,734	+		RR42_RS33985	0.42	+1.5
3,052,816	+		RR42_RS33985	0.61	+0.4
3,052,816	+		RR42_RS33985	0.61	-1.1
3,052,816	+		RR42_RS33985	0.61	-1.0
3,052,817	-		RR42_RS33985	0.61	+2.4
3,052,818	+		RR42_RS33985	0.62	+1.1
3,052,818	+		RR42_RS33985	0.62	+0.4
3,052,819	-		RR42_RS33985	0.62	-0.3
3,052,831	+		RR42_RS33985	0.65	-0.1
3,052,832	-		RR42_RS33985	0.65	-1.0
3,052,832	-		RR42_RS33985	0.65	+0.3
3,052,918	+		RR42_RS33985	0.85	-1.3
3,053,059	+				+0.7
3,053,059	+				+0.5
3,053,059	+				+1.0
3,053,059	+				-0.6
3,053,059	+				-0.3
3,053,059	+				+0.1
3,053,060	-				-1.7
3,053,060	-				-0.7
3,053,060	-				-0.0
3,053,149	+				+1.0
3,053,151	+				+0.2
3,053,152	-				-0.6
3,053,152	-				-0.3
3,053,273	-				-1.2
3,053,273	-				-0.0
3,053,283	-				-0.5
3,053,285	+				+1.0
3,053,286	-				+0.6
3,053,286	-				+0.5
3,053,286	-				+0.3
3,053,286	-				+0.4
3,053,288	+				+1.9
3,053,337	+				-0.5
3,053,338	-				-1.4
3,053,472	+				+1.2
3,053,473	-				-0.3
3,053,556	-				+0.6
3,053,579	-				+0.3
3,053,597	+				+0.3
3,053,597	+				+0.7
3,053,598	-				-0.4
3,053,645	-				-0.6
3,053,718	-				-0.5
3,053,767	-				+0.2
3,053,773	-				+0.8
3,053,791	+				+1.0
3,053,798	+				+0.1
3,053,873	+				+0.1
3,053,874	-				+0.1
3,053,874	-				-1.1
3,053,874	-				-1.0
3,053,890	-				+0.4
3,053,960	+				+1.7
3,053,960	+				-0.2