Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32105

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
2,586,403	+				-0.2
2,586,409	+				-2.0
2,586,416	-				-0.6
2,586,416	-				+0.8
2,586,705	-				+1.2
2,586,985	-				+0.4
2,587,061	+				-0.2
2,587,123	+				+0.3
2,587,175	+				+1.1
2,587,176	-				-0.2
2,587,504	+		RR42_RS32105	0.68	-1.8
2,587,504	+		RR42_RS32105	0.68	-0.3
2,587,505	-		RR42_RS32105	0.68	-1.0
2,587,573	-		RR42_RS32105	0.81	+0.2
2,587,573	-		RR42_RS32105	0.81	+0.0
2,587,573	-		RR42_RS32105	0.81	-0.3
2,587,599	-		RR42_RS32105	0.86	+0.2
2,587,629	+				-1.0
2,587,629	+				-1.8
2,587,694	+				+0.7
2,587,750	+				-0.5
2,587,750	+				-0.2
2,588,001	-				+0.4
2,588,001	-				+0.6
2,588,001	-				-0.8
2,588,001	-				-0.1
2,588,001	-				-1.8
2,588,001	-				-0.1
2,588,001	-				-0.5
2,588,003	-				+0.4
2,588,003	-				-0.5
2,588,010	+				-0.2
2,588,011	-				+0.3
2,588,011	-				-0.2
2,588,055	+				+0.2
2,588,055	+				-0.1
2,588,056	-				+0.4
2,588,506	+		RR42_RS32110	0.25	+0.4