Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31900

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
2,533,904	+				+0.2
2,533,905	-				-0.2
2,534,097	-				-0.8
2,534,097	-				-1.0
2,534,264	+				+0.1
2,534,264	+				-0.1
2,534,265	-				+0.3
2,534,501	+		RR42_RS31900	0.35	-1.7
2,534,502	-		RR42_RS31900	0.35	-1.8
2,534,580	+		RR42_RS31900	0.45	+0.8
2,534,581	-		RR42_RS31900	0.45	-1.0
2,534,669	-		RR42_RS31900	0.56	-0.6
2,534,987	+				+1.1
2,534,988	-				-1.8
2,534,988	-				+0.4
2,535,098	+				+0.8
2,535,098	+				+0.2
2,535,099	-				-0.2
2,535,127	+				-0.8
2,535,265	+		RR42_RS31905	0.18	+0.5
2,535,268	+		RR42_RS31905	0.18	-0.1
2,535,268	+		RR42_RS31905	0.18	-0.8
2,535,269	-		RR42_RS31905	0.18	+0.2
2,535,274	+		RR42_RS31905	0.19	-0.9
2,535,275	-		RR42_RS31905	0.19	-0.0
2,535,367	+		RR42_RS31905	0.26	-1.0
2,535,368	-		RR42_RS31905	0.26	-0.3
2,535,981	-		RR42_RS31905	0.76	-2.0