Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31425

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
2,431,537	+		RR42_RS31420	0.34	-3.7
2,431,538	-		RR42_RS31420	0.34	-2.5
2,431,538	-		RR42_RS31420	0.34	-0.0
2,431,538	-		RR42_RS31420	0.34	-0.9
2,431,655	-		RR42_RS31420	0.52	+0.4
2,431,809	-		RR42_RS31420	0.76	+0.4
2,432,053	+				-0.5
2,432,054	-				+1.7
2,432,054	-				-0.5
2,432,054	-				-0.5
2,432,082	+				+1.4
2,432,083	-				-0.8
2,432,083	-				-0.1
2,432,083	-				-1.9
2,432,084	+				-1.9
2,432,172	+				+2.7
2,432,172	+				+0.4
2,432,231	-				-1.1
2,432,266	+				+0.6
2,432,267	-				+0.4
2,432,270	-				-0.8
2,432,270	-				+0.8
2,432,306	-				-0.0
2,432,354	+				-0.3
2,432,409	+				-2.2
2,432,592	+		RR42_RS31425	0.23	+0.9
2,433,043	+		RR42_RS31425	0.88	-0.4
2,433,049	+		RR42_RS31425	0.89	+0.0
2,433,121	+				-1.4
2,433,130	-				-0.5
2,433,144	+				+1.2
2,433,176	-				+0.7
2,433,245	+				+0.2
2,433,246	-				+0.1
2,433,373	-				-0.9
2,433,373	-				-2.0
2,433,494	-		RR42_RS31430	0.13	-2.6
2,433,701	-		RR42_RS31430	0.24	-0.7
2,433,747	+		RR42_RS31430	0.26	+1.4
2,433,848	-		RR42_RS31430	0.32	+0.3
2,433,989	-		RR42_RS31430	0.39	+0.4
2,434,043	-		RR42_RS31430	0.42	+0.7