Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31055

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
2,346,185	-		RR42_RS31050	0.21	-1.5
2,346,185	-		RR42_RS31050	0.21	-0.2
2,346,185	-		RR42_RS31050	0.21	-0.4
2,346,185	-		RR42_RS31050	0.21	+1.4
2,346,192	-		RR42_RS31050	0.21	+0.3
2,346,587	+		RR42_RS31050	0.62	-0.1
2,346,588	-		RR42_RS31050	0.62	+1.8
2,346,588	-		RR42_RS31050	0.62	+0.2
2,346,818	+		RR42_RS31050	0.86	-0.8
2,346,819	-		RR42_RS31050	0.86	+0.5
2,346,897	+				+1.1
2,346,898	-				-0.5
2,347,081	+				-0.2
2,347,081	+				-0.2
2,347,081	+				-1.0
2,347,082	-				+0.7
2,347,640	+		RR42_RS31055	0.52	-2.2
2,347,931	-		RR42_RS31055	0.83	+0.1
2,348,148	+				+0.1
2,348,253	+				+0.9
2,348,253	+				-0.1
2,348,253	+				+0.7
2,348,254	-				-2.2
2,348,254	-				+0.1
2,348,500	+		RR42_RS31060	0.21	+0.1
2,348,500	+		RR42_RS31060	0.21	-0.3
2,348,501	-		RR42_RS31060	0.21	-1.6
2,348,501	-		RR42_RS31060	0.21	+0.5
2,348,613	+		RR42_RS31060	0.28	+0.5
2,348,614	-		RR42_RS31060	0.28	+0.2
2,348,614	-		RR42_RS31060	0.28	-1.0
2,348,760	+		RR42_RS31060	0.37	-0.2
2,348,760	+		RR42_RS31060	0.37	-0.4
2,348,760	+		RR42_RS31060	0.37	-0.3
2,348,760	+		RR42_RS31060	0.37	+0.3
2,348,761	-		RR42_RS31060	0.37	-0.6
2,348,761	-		RR42_RS31060	0.37	-0.1
2,348,872	+		RR42_RS31060	0.44	+0.7
2,348,872	+		RR42_RS31060	0.44	-0.4
2,348,872	+		RR42_RS31060	0.44	-0.5
2,348,873	-		RR42_RS31060	0.44	-0.4
2,348,873	-		RR42_RS31060	0.44	-0.2
2,349,006	+				+0.7
2,349,041	+		RR42_RS31060	0.55	+0.8
2,349,041	+		RR42_RS31060	0.55	+1.2
2,349,071	+		RR42_RS31060	0.57	+0.3