Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29550
Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Doxycycline hyclate 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,984,504 | - | +0.2 | |||
1,984,507 | + | -0.9 | |||
1,984,668 | + | -1.1 | |||
1,984,669 | - | -0.4 | |||
1,984,912 | + | RR42_RS29545 | 0.38 | -0.3 | |
1,984,912 | + | RR42_RS29545 | 0.38 | +0.3 | |
1,984,955 | + | RR42_RS29545 | 0.43 | +1.1 | |
1,984,956 | - | RR42_RS29545 | 0.44 | +0.4 | |
1,985,423 | + | +0.9 | |||
1,985,423 | + | -0.3 | |||
1,985,424 | - | +0.3 | |||
1,985,424 | - | -2.1 | |||
1,985,424 | - | -2.5 | |||
1,985,424 | - | -1.1 | |||
1,985,501 | - | -0.2 | |||
1,985,501 | - | +0.9 |
Or see this region's nucleotide sequence