Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27695

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,577,777	+		RR42_RS27690	0.64	+0.6
1,578,028	-		RR42_RS27690	0.81	-0.9
1,578,110	+		RR42_RS27690	0.86	-0.1
1,578,131	+		RR42_RS27690	0.88	+0.3
1,578,132	-		RR42_RS27690	0.88	+0.6
1,578,157	+		RR42_RS27690	0.89	-1.3
1,578,158	-		RR42_RS27690	0.89	-2.0
1,578,158	-		RR42_RS27690	0.89	-0.6
1,578,412	+				-0.4
1,578,413	-				+0.4
1,578,417	+				-1.3
1,578,417	+				+1.4
1,578,417	+				+0.2
1,578,417	+				+0.7
1,578,417	+				+2.0
1,578,418	-				-0.3
1,578,418	-				+1.0
1,578,418	-				+0.4
1,578,641	+		RR42_RS27695	0.15	-1.3
1,578,691	-		RR42_RS27695	0.24	-1.0
1,578,912	+		RR42_RS27695	0.65	+0.5
1,578,913	-		RR42_RS27695	0.65	-0.2
1,579,178	-				-1.6
1,579,178	-				+2.3
1,579,293	+				+1.2
1,579,296	-				-1.3
1,579,370	+		RR42_RS27700	0.12	-1.1
1,579,371	-		RR42_RS27700	0.12	+1.6
1,579,607	+				-2.1
1,579,618	+				-0.3
1,579,618	+				+0.0
1,579,640	+				-0.3
1,579,641	-				-0.5
1,579,775	-		RR42_RS27705	0.13	-0.0
1,579,892	+		RR42_RS27705	0.27	-0.4
1,579,952	-		RR42_RS27705	0.34	+1.1