Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27655

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,566,551	+		RR42_RS27650	0.36	-0.3
1,566,551	+		RR42_RS27650	0.36	-0.3
1,566,566	+		RR42_RS27650	0.38	-0.2
1,566,567	-		RR42_RS27650	0.38	+0.5
1,566,596	+		RR42_RS27650	0.41	+1.9
1,566,596	+		RR42_RS27650	0.41	+0.1
1,566,597	-		RR42_RS27650	0.41	-0.8
1,566,701	+		RR42_RS27650	0.51	+0.4
1,566,833	+		RR42_RS27650	0.65	+1.9
1,566,834	-		RR42_RS27650	0.65	+0.4
1,566,834	-		RR42_RS27650	0.65	+0.3
1,566,834	-		RR42_RS27650	0.65	+0.4
1,566,838	-		RR42_RS27650	0.65	+0.7
1,567,046	+		RR42_RS27650	0.86	-1.3
1,567,047	-		RR42_RS27650	0.86	-0.2
1,567,074	-		RR42_RS27650	0.89	-1.1
1,567,074	-		RR42_RS27650	0.89	+0.7
1,567,076	+		RR42_RS27650	0.89	-0.1
1,567,076	+		RR42_RS27650	0.89	-0.4
1,567,076	+		RR42_RS27650	0.89	-0.7
1,567,077	-		RR42_RS27650	0.90	+0.0
1,567,077	-		RR42_RS27650	0.90	-0.3
1,567,106	+				+0.9
1,567,106	+				+0.3
1,567,287	-				+0.5
1,567,304	-				-1.0
1,567,304	-				+0.9
1,567,304	-				-0.0
1,567,312	+				-0.1
1,567,312	+				+0.1
1,567,312	+				+0.2
1,567,353	+				+0.9
1,567,354	-				-0.4
1,567,359	-				-0.3
1,567,478	+				+0.1
1,567,652	+		RR42_RS27655	0.21	+0.0
1,568,072	+		RR42_RS27655	0.73	-0.1
1,568,073	-		RR42_RS27655	0.73	+1.3
1,568,073	-		RR42_RS27655	0.73	-0.0
1,568,142	-		RR42_RS27655	0.81	+0.3
1,568,315	+				+0.5
1,568,368	-				-1.3
1,568,368	-				+3.0
1,568,418	+				+0.1
1,568,715	+		RR42_RS27660	0.45	+2.8
1,569,096	+				+0.7
1,569,239	+				+0.9
1,569,239	+				-0.2
1,569,239	+				+0.8