Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26385

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,275,243	+		RR42_RS26380	0.39	-0.7
1,275,243	+		RR42_RS26380	0.39	-0.0
1,275,244	-		RR42_RS26380	0.39	+0.6
1,275,244	-		RR42_RS26380	0.39	-0.5
1,275,309	+		RR42_RS26380	0.44	+0.4
1,275,310	-		RR42_RS26380	0.44	-0.0
1,275,550	-		RR42_RS26380	0.63	+0.1
1,275,687	+		RR42_RS26380	0.73	-0.1
1,275,688	-		RR42_RS26380	0.73	-0.1
1,275,801	+		RR42_RS26380	0.82	+0.1
1,275,826	-		RR42_RS26380	0.84	-1.9
1,275,927	+				+0.7
1,275,966	+				-0.1
1,275,967	-				+0.4
1,275,967	-				+0.0
1,275,977	+				+0.6
1,275,986	+				+0.9
1,275,987	-				+0.4
1,276,043	-				+1.7
1,276,054	+				-0.6
1,276,093	+				+0.5
1,276,333	+		RR42_RS26385	0.20	+0.4
1,276,333	+		RR42_RS26385	0.20	-0.2
1,276,389	+		RR42_RS26385	0.24	+0.6
1,276,390	-		RR42_RS26385	0.24	+0.4
1,276,526	-		RR42_RS26385	0.34	+0.7
1,277,044	+		RR42_RS26385	0.72	+0.4
1,277,045	-		RR42_RS26385	0.72	+0.5
1,277,045	-		RR42_RS26385	0.72	+1.1
1,277,471	+				-0.2
1,277,527	-				+0.3
1,277,528	+				-1.0
1,277,528	+				+0.4
1,277,528	+				+0.4
1,277,528	+				-0.4
1,277,903	+		RR42_RS26390	0.22	+0.4
1,277,908	-		RR42_RS26390	0.22	-0.1
1,277,908	-		RR42_RS26390	0.22	-0.6
1,278,064	-		RR42_RS26390	0.30	-0.3
1,278,389	+		RR42_RS26390	0.46	-0.0
1,278,390	-		RR42_RS26390	0.46	+0.7