Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26305

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,261,229	+				-0.3
1,261,256	-				-0.5
1,261,256	-				-1.1
1,261,256	-				+1.0
1,261,256	-				-0.1
1,261,397	+				-2.2
1,261,397	+				-0.7
1,261,397	+				+0.2
1,261,398	-				-0.5
1,261,520	+				-0.4
1,261,521	-				+0.4
1,261,535	+				-1.8
1,261,536	-				-0.6
1,261,756	+				-1.7
1,261,757	-				-2.5
1,261,757	-				-0.1
1,261,757	-				+0.1
1,261,757	-				+0.1
1,261,796	+		RR42_RS26305	0.11	+0.2
1,261,796	+		RR42_RS26305	0.11	+1.0
1,261,797	-		RR42_RS26305	0.11	+0.9
1,261,797	-		RR42_RS26305	0.11	+1.0
1,261,899	+		RR42_RS26305	0.43	+0.1
1,261,935	+		RR42_RS26305	0.54	+0.3
1,261,935	+		RR42_RS26305	0.54	+0.3
1,262,275	+				+0.6
1,262,275	+				+0.2
1,262,275	+				-1.0
1,262,606	+		RR42_RS26310	0.29	-0.7
1,262,607	-		RR42_RS26310	0.29	+0.7
1,262,615	+		RR42_RS26310	0.29	+0.2
1,262,905	+		RR42_RS26310	0.49	+1.1
1,263,016	+		RR42_RS26310	0.57	+0.5
1,263,016	+		RR42_RS26310	0.57	-0.6
1,263,016	+		RR42_RS26310	0.57	+0.2
1,263,016	+		RR42_RS26310	0.57	-1.3
1,263,016	+		RR42_RS26310	0.57	+0.4
1,263,016	+		RR42_RS26310	0.57	+1.7
1,263,016	+		RR42_RS26310	0.57	+1.9
1,263,016	+		RR42_RS26310	0.57	+0.1
1,263,017	-		RR42_RS26310	0.57	-0.9
1,263,017	-		RR42_RS26310	0.57	+1.4
1,263,017	-		RR42_RS26310	0.57	-0.1