Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20855

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
2,573	+				-0.9
2,644	+				-1.3
2,644	+				-2.1
2,645	-				-0.5
2,645	-				-1.8
2,645	-				-0.7
2,667	-				-0.1
2,773	-		RR42_RS20855	0.24	-1.2
2,773	-		RR42_RS20855	0.24	-2.0
2,773	-		RR42_RS20855	0.24	-1.3
2,874	-		RR42_RS20855	0.74	-0.8
2,874	-		RR42_RS20855	0.74	-1.2
2,956	+				-0.3
2,956	+				+0.7
2,957	-				-0.7
2,957	-				-1.5
2,976	-				-0.1
2,995	+				-0.0
2,995	+				+1.2
3,006	-				-0.5
3,006	-				-0.5
3,064	+				-3.2
3,065	-				-1.8
3,078	-				+0.4
3,078	-				-2.3
3,118	+				-0.5
3,189	+				-1.2