Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20645

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
4,480,879	-				-1.2
4,480,879	-				-3.1
4,480,879	-				-1.8
4,480,879	-				-5.1
4,480,879	-				-3.7
4,480,879	-				-3.3
4,480,881	-				-1.8
4,480,883	-				-2.6
4,480,883	-				-0.9
4,480,937	+				+6.2
4,480,938	-				+2.2
4,480,940	-				-3.4
4,481,045	+				+2.7
4,481,046	-				-2.6
4,481,096	+				+4.8
4,481,097	-				-4.4
4,481,103	-				-1.6
4,481,103	-				-1.4
4,481,209	-				-3.6
4,481,230	+				-1.2
4,482,444	-				-4.6
4,482,475	+				-1.6
4,482,475	+				-2.8
4,482,476	-				-4.0
4,482,476	-				-0.9
4,482,491	-				-3.3
4,482,689	-				-3.0
4,482,704	+				-1.4
4,482,704	+				-4.7
4,482,705	-				-1.9
4,482,705	-				-2.1
4,482,705	-				-3.7
4,482,707	+				+0.4
4,482,707	+				-3.0
4,482,707	+				-4.1
4,482,881	+		RR42_RS20650	0.13	-3.7
4,482,881	+		RR42_RS20650	0.13	-3.3
4,482,881	+		RR42_RS20650	0.13	-2.9
4,482,882	-		RR42_RS20650	0.13	-3.2
4,482,882	-		RR42_RS20650	0.13	-1.6
4,482,882	-		RR42_RS20650	0.13	-2.3
4,482,882	-		RR42_RS20650	0.13	-2.0
4,482,882	-		RR42_RS20650	0.13	-1.9
4,482,882	-		RR42_RS20650	0.13	-3.0
4,482,944	+		RR42_RS20650	0.15	-2.9
4,482,944	+		RR42_RS20650	0.15	-1.6
4,482,944	+		RR42_RS20650	0.15	-0.6
4,482,944	+		RR42_RS20650	0.15	-2.3
4,482,944	+		RR42_RS20650	0.15	-1.4
4,482,945	-		RR42_RS20650	0.15	-0.2
4,483,019	+		RR42_RS20650	0.17	-3.2
4,483,020	-		RR42_RS20650	0.17	-1.2
4,483,020	-		RR42_RS20650	0.17	-1.6
4,483,178	-		RR42_RS20650	0.22	-3.9
4,483,299	-		RR42_RS20650	0.26	-2.4
4,483,442	+		RR42_RS20650	0.31	-3.1
4,483,442	+		RR42_RS20650	0.31	-2.1
4,483,443	-		RR42_RS20650	0.31	-0.6
4,483,443	-		RR42_RS20650	0.31	-3.9
4,483,443	-		RR42_RS20650	0.31	-2.4