Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19865

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
4,287,636	-				-0.2
4,287,981	+		RR42_RS19860	0.40	+0.1
4,288,313	+		RR42_RS19860	0.76	-1.6
4,288,533	+				-0.0
4,288,574	-				-0.4
4,288,793	+		RR42_RS19865	0.13	+0.7
4,288,793	+		RR42_RS19865	0.13	+0.2
4,289,108	+		RR42_RS19865	0.37	-1.4
4,289,109	-		RR42_RS19865	0.37	-0.8
4,289,109	-		RR42_RS19865	0.37	+0.0
4,289,320	+		RR42_RS19865	0.53	-0.5
4,289,320	+		RR42_RS19865	0.53	+0.5
4,289,321	-		RR42_RS19865	0.53	+0.6
4,289,935	+				+0.3
4,290,899	+		RR42_RS19870	0.61	+0.6
4,290,900	-		RR42_RS19870	0.61	+0.4
4,290,900	-		RR42_RS19870	0.61	+0.5
4,290,900	-		RR42_RS19870	0.61	-0.5