Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17705

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,830,171	+				+1.5
3,830,171	+				+2.8
3,830,172	-				+2.2
3,830,654	+		RR42_RS17705	0.50	+0.5
3,830,655	-		RR42_RS17705	0.50	+0.7
3,830,707	+		RR42_RS17705	0.56	-1.9
3,830,809	+		RR42_RS17705	0.67	+0.0
3,830,809	+		RR42_RS17705	0.67	+1.1
3,830,809	+		RR42_RS17705	0.67	-1.6
3,830,810	-		RR42_RS17705	0.67	+2.4
3,830,811	+		RR42_RS17705	0.67	-1.9
3,830,812	-		RR42_RS17705	0.68	+0.3
3,830,839	-		RR42_RS17705	0.70	+0.5
3,830,875	+		RR42_RS17705	0.74	+0.5
3,830,875	+		RR42_RS17705	0.74	-0.1
3,830,875	+		RR42_RS17705	0.74	+0.2
3,830,876	-		RR42_RS17705	0.75	+0.5
3,830,876	-		RR42_RS17705	0.75	+2.0
3,830,876	-		RR42_RS17705	0.75	-0.3
3,831,013	+		RR42_RS17705	0.90	+1.5
3,831,568	+		RR42_RS17710	0.29	+1.0
3,831,569	-		RR42_RS17710	0.29	+1.0
3,831,580	+		RR42_RS17710	0.30	+0.1
3,831,581	-		RR42_RS17710	0.30	+0.9
3,831,581	-		RR42_RS17710	0.30	-0.8
3,831,620	-		RR42_RS17710	0.32	-0.8
3,831,779	+		RR42_RS17710	0.43	-1.0
3,831,780	-		RR42_RS17710	0.43	+0.7
3,831,875	+		RR42_RS17710	0.49	-0.5
3,832,031	-		RR42_RS17710	0.59	-0.1
3,832,031	-		RR42_RS17710	0.59	-0.9