Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17255

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,733,993	+				+0.2
3,735,089	+		RR42_RS17255	0.20	-0.7
3,735,090	-		RR42_RS17255	0.20	+0.7
3,735,090	-		RR42_RS17255	0.20	-0.5
3,735,188	+		RR42_RS17255	0.34	+1.7
3,735,238	+		RR42_RS17255	0.41	-1.8
3,735,485	-		RR42_RS17255	0.77	+1.5
3,735,556	+		RR42_RS17255	0.87	+1.6
3,735,557	-		RR42_RS17255	0.87	+0.2
3,735,741	-				+0.6
3,735,763	-				-0.2
3,735,961	+		RR42_RS17260	0.39	-1.1
3,735,961	+		RR42_RS17260	0.39	+0.7
3,736,015	+		RR42_RS17260	0.47	-0.3
3,736,015	+		RR42_RS17260	0.47	+0.2
3,736,411	+				+0.7
3,736,411	+				+1.2
3,736,411	+				+1.5
3,736,412	-				-0.4
3,736,441	+				-1.8
3,736,442	-				+0.2
3,736,442	-				+1.8
3,736,505	+				+2.1
3,736,506	-				-1.6
3,736,522	+				-0.7
3,736,522	+				+1.1
3,736,522	+				-0.3
3,736,523	-				+0.8