Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16585

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,594,039	-		RR42_RS16580	0.79	-0.1
3,594,054	-		RR42_RS16580	0.80	-1.7
3,594,313	-				-1.0
3,594,563	-				-0.7
3,594,563	-				+0.4
3,594,699	-				+0.7
3,594,699	-				+0.1
3,594,699	-				+0.7
3,594,744	+				-1.2
3,594,973	+		RR42_RS16585	0.25	-0.5
3,594,990	+		RR42_RS16585	0.28	-0.5
3,595,063	+		RR42_RS16585	0.39	-0.3
3,595,063	+		RR42_RS16585	0.39	-1.9
3,595,064	-		RR42_RS16585	0.39	+0.3
3,595,064	-		RR42_RS16585	0.39	-0.4
3,595,064	-		RR42_RS16585	0.39	-1.6
3,595,064	-		RR42_RS16585	0.39	+0.8
3,595,064	-		RR42_RS16585	0.39	-0.6
3,595,064	-		RR42_RS16585	0.39	+0.6
3,595,078	+		RR42_RS16585	0.42	+0.1
3,595,134	+		RR42_RS16585	0.51	+0.6
3,595,135	-		RR42_RS16585	0.51	-1.6
3,595,295	+		RR42_RS16585	0.77	+1.7
3,595,313	+		RR42_RS16585	0.80	-3.3
3,595,313	+		RR42_RS16585	0.80	-0.3
3,595,314	-		RR42_RS16585	0.80	-2.0
3,595,381	+				+0.0
3,595,382	-				-0.9
3,595,492	+				+0.6
3,595,493	-				+1.1
3,595,515	+				-0.3
3,595,515	+				+0.9
3,595,515	+				+0.6
3,595,648	+		RR42_RS16590	0.20	-0.2
3,595,723	+		RR42_RS16590	0.31	-1.0
3,595,740	+		RR42_RS16590	0.34	-2.9
3,595,986	+		RR42_RS16590	0.70	+0.4
3,595,987	-		RR42_RS16590	0.70	+0.6
3,596,241	-				-0.1
3,596,275	+				-0.9
3,596,277	+				+0.3
3,596,277	+				+0.2
3,596,279	+				-0.4
3,596,280	-				-0.2
3,596,407	-		RR42_RS16595	0.11	-0.8
3,596,431	+		RR42_RS16595	0.13	-0.7
3,596,431	+		RR42_RS16595	0.13	-0.2
3,596,431	+		RR42_RS16595	0.13	+1.0
3,596,432	-		RR42_RS16595	0.13	-0.0