Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16240

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,516,009	-				-0.1
3,516,009	-				-1.5
3,516,060	+				-0.3
3,516,060	+				+1.0
3,516,061	-				-0.8
3,516,418	+		RR42_RS16240	0.90	-1.0
3,516,418	+		RR42_RS16240	0.90	-2.7
3,516,614	+				+0.2
3,516,615	-				-0.3
3,516,632	+				+0.3
3,516,633	-				-1.9
3,516,633	-				+1.3
3,516,672	+				-0.8
3,516,673	-				+0.7
3,516,673	-				+0.9
3,516,673	-				-1.7
3,516,930	+		RR42_RS16245	0.36	+0.6
3,516,930	+		RR42_RS16245	0.36	-1.4
3,516,930	+		RR42_RS16245	0.36	-0.3
3,516,930	+		RR42_RS16245	0.36	-1.7
3,516,931	-		RR42_RS16245	0.36	+0.1
3,516,931	-		RR42_RS16245	0.36	+0.7
3,516,931	-		RR42_RS16245	0.36	+0.7
3,516,933	+		RR42_RS16245	0.37	+0.9
3,516,933	+		RR42_RS16245	0.37	-0.9
3,516,944	-		RR42_RS16245	0.38	-1.3
3,517,096	-		RR42_RS16245	0.58	+0.1
3,517,370	-				+1.3
3,517,407	+				+0.2
3,517,456	+				+0.0
3,517,456	+				+0.9
3,517,456	+				+1.4