Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15765

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
3,407,326	-				-1.0
3,407,326	-				+1.6
3,407,601	-		RR42_RS15765	0.20	+1.6
3,407,608	+		RR42_RS15765	0.20	-1.4
3,407,608	+		RR42_RS15765	0.20	-0.8
3,407,609	-		RR42_RS15765	0.20	+1.5
3,407,609	-		RR42_RS15765	0.20	+2.4
3,407,609	-		RR42_RS15765	0.20	+1.5
3,407,609	-		RR42_RS15765	0.20	+2.0
3,407,644	-		RR42_RS15765	0.24	+0.4
3,407,741	-		RR42_RS15765	0.35	+1.2
3,407,741	-		RR42_RS15765	0.35	+1.7
3,407,754	-		RR42_RS15765	0.36	+1.6
3,407,786	-		RR42_RS15765	0.39	+2.0
3,407,880	-		RR42_RS15765	0.49	+1.0
3,407,882	-		RR42_RS15765	0.50	+0.7
3,407,951	+		RR42_RS15765	0.57	-3.3
3,407,959	+		RR42_RS15765	0.58	-1.6
3,408,297	+				-1.8
3,408,304	+				-2.1
3,408,390	+				-2.1
3,408,390	+				-1.2
3,408,390	+				-0.7
3,408,391	-				+0.9
3,408,433	-				-4.6
3,408,645	+		RR42_RS15770	0.16	-2.7
3,408,645	+		RR42_RS15770	0.16	-0.1
3,408,681	+		RR42_RS15770	0.19	-0.9
3,408,681	+		RR42_RS15770	0.19	-0.9
3,408,708	+		RR42_RS15770	0.20	-1.9
3,408,990	+		RR42_RS15770	0.38	-1.0
3,408,990	+		RR42_RS15770	0.38	-3.1
3,409,239	+		RR42_RS15770	0.54	-2.2
3,409,335	+		RR42_RS15770	0.61	-0.7
3,409,335	+		RR42_RS15770	0.61	-2.1