Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12530

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
2,691,689	+		RR42_RS12520	0.27	+1.4
2,691,690	-		RR42_RS12520	0.27	+1.1
2,691,690	-		RR42_RS12520	0.27	+2.1
2,691,875	+		RR42_RS12520	0.66	+0.9
2,691,875	+		RR42_RS12520	0.66	+1.4
2,691,979	+		RR42_RS12520	0.89	+0.9
2,691,979	+		RR42_RS12520	0.89	-0.2
2,691,980	-		RR42_RS12520	0.89	+1.5
2,692,019	-				+0.9
2,692,091	-		RR42_RS12525	0.22	+0.7
2,692,307	+				+0.9
2,692,308	-				-0.4
2,692,344	+				+0.3
2,692,344	+				+1.0
2,692,344	+				+0.3
2,692,599	+		RR42_RS12530	0.24	+0.9
2,692,600	-		RR42_RS12530	0.24	+1.2
2,692,600	-		RR42_RS12530	0.24	+1.9
2,692,752	+		RR42_RS12530	0.36	+0.3
2,692,752	+		RR42_RS12530	0.36	+1.1
2,692,752	+		RR42_RS12530	0.36	+2.2
2,692,753	-		RR42_RS12530	0.36	+1.3
2,692,753	-		RR42_RS12530	0.36	-0.6
2,692,753	-		RR42_RS12530	0.36	+0.7
2,692,753	-		RR42_RS12530	0.36	+1.5
2,692,928	+		RR42_RS12530	0.50	+0.8
2,692,928	+		RR42_RS12530	0.50	+0.6
2,692,929	-		RR42_RS12530	0.50	-0.4
2,693,574	+				+0.7
2,693,583	+				+1.7
2,693,583	+				+0.9
2,693,583	+				-1.9
2,693,584	-				+0.4
2,693,584	-				+0.7
2,693,584	-				+0.9
2,693,584	-				+0.6
2,693,584	-				-0.2
2,693,706	+				-0.1
2,693,706	+				-0.1