Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08710

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,822,278	+				-0.6
1,822,346	-				+0.3
1,822,363	+				-0.9
1,822,364	-				+0.2
1,822,364	-				+0.2
1,822,364	-				+0.4
1,822,463	+				-0.8
1,822,463	+				-1.3
1,822,498	+				+0.1
1,822,499	-				+2.1
1,822,757	-		RR42_RS08705	0.44	-0.4
1,822,757	-		RR42_RS08705	0.44	-0.9
1,822,929	+		RR42_RS08705	0.68	-0.5
1,822,930	-		RR42_RS08705	0.69	-0.4
1,823,031	+		RR42_RS08705	0.83	+1.3
1,823,031	+		RR42_RS08705	0.83	+0.4
1,823,031	+		RR42_RS08705	0.83	+0.3
1,823,031	+		RR42_RS08705	0.83	+0.3
1,823,032	-		RR42_RS08705	0.83	-1.0
1,823,134	-				-0.0
1,823,375	-		RR42_RS08710	0.18	+2.1
1,823,459	+		RR42_RS08710	0.29	+0.3
1,823,505	+		RR42_RS08710	0.35	+0.5
1,823,640	+		RR42_RS08710	0.53	-0.9
1,823,641	-		RR42_RS08710	0.53	+0.8
1,823,677	+		RR42_RS08710	0.58	-0.0
1,823,777	-		RR42_RS08710	0.71	+0.0
1,823,817	+		RR42_RS08710	0.76	-0.6
1,823,868	+		RR42_RS08710	0.83	+0.2
1,823,868	+		RR42_RS08710	0.83	-1.0
1,823,869	-		RR42_RS08710	0.83	-0.2
1,823,869	-		RR42_RS08710	0.83	+0.5
1,823,896	+		RR42_RS08710	0.86	+1.1
1,823,896	+		RR42_RS08710	0.86	+0.2
1,823,952	-				+0.1
1,824,021	+				+0.5
1,824,022	-				+1.4
1,824,068	+				+0.5
1,824,173	+				-1.3
1,824,173	+				+0.1
1,824,173	+				+0.6
1,824,173	+				-0.8
1,824,174	-				-1.8
1,824,174	-				-0.7
1,824,366	+		RR42_RS08715	0.25	-0.2
1,824,367	-		RR42_RS08715	0.25	+1.3
1,824,954	+		RR42_RS08715	0.89	+1.3
1,824,954	+		RR42_RS08715	0.89	+0.5
1,824,955	+		RR42_RS08715	0.89	+0.6