Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08340

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,764,139	+				+0.4
1,764,208	-				+0.4
1,764,527	+		RR42_RS08335	0.38	+0.7
1,764,527	+		RR42_RS08335	0.38	+1.1
1,764,620	-		RR42_RS08335	0.48	+0.5
1,764,659	+		RR42_RS08335	0.53	+0.2
1,764,660	-		RR42_RS08335	0.53	+0.8
1,764,660	-		RR42_RS08335	0.53	+1.1
1,764,707	-		RR42_RS08335	0.58	+0.3
1,764,920	+		RR42_RS08335	0.83	-0.1
1,764,921	-		RR42_RS08335	0.83	+0.4
1,764,929	+		RR42_RS08335	0.84	-0.5
1,764,930	-		RR42_RS08335	0.84	+1.0
1,764,965	+		RR42_RS08335	0.88	+2.4
1,764,965	+		RR42_RS08335	0.88	+0.1
1,764,966	-		RR42_RS08335	0.88	-0.5
1,765,092	+				-2.0
1,765,099	-				-0.3
1,765,101	+				-0.2
1,765,101	+				+0.2
1,765,101	+				-1.2
1,765,102	-				+0.5
1,765,263	+		RR42_RS08340	0.46	-0.8
1,765,470	-				+0.6
1,765,741	+		RR42_RS08345	0.23	-0.2
1,765,774	-		RR42_RS08345	0.26	+1.0
1,765,876	-		RR42_RS08345	0.35	+0.4
1,766,020	-		RR42_RS08345	0.48	+0.4
1,766,197	-		RR42_RS08345	0.63	+1.1
1,766,197	-		RR42_RS08345	0.63	+0.2
1,766,478	+		RR42_RS08345	0.88	-0.3