Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07935

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,704,125	+		RR42_RS07930	0.23	+0.9
1,704,126	-		RR42_RS07930	0.23	-1.3
1,704,126	-		RR42_RS07930	0.23	+1.0
1,704,128	-		RR42_RS07930	0.23	-0.2
1,704,191	-		RR42_RS07930	0.29	-1.7
1,704,556	+		RR42_RS07930	0.64	-0.4
1,704,556	+		RR42_RS07930	0.64	+0.9
1,704,600	+		RR42_RS07930	0.68	+0.9
1,704,915	+				+0.7
1,704,915	+				+1.2
1,704,940	-				-0.4
1,704,940	-				+1.2
1,705,269	-		RR42_RS07935	0.28	-1.7
1,705,310	+		RR42_RS07935	0.31	+0.5
1,705,311	-		RR42_RS07935	0.31	-2.1
1,705,311	-		RR42_RS07935	0.31	-0.6
1,705,373	+		RR42_RS07935	0.37	-1.4
1,705,373	+		RR42_RS07935	0.37	-1.0
1,705,377	+		RR42_RS07935	0.37	-0.4
1,705,691	+		RR42_RS07935	0.66	-0.1
1,705,692	-		RR42_RS07935	0.66	+0.3
1,706,532	+		RR42_RS07940	0.53	+0.6
1,706,563	+		RR42_RS07940	0.57	+1.5
1,706,584	-		RR42_RS07940	0.59	-1.3
1,706,721	+		RR42_RS07940	0.74	+1.1
1,706,722	-		RR42_RS07940	0.75	+1.4