Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07440

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,590,317	+		RR42_RS07435	0.29	+1.0
1,590,318	-		RR42_RS07435	0.29	+0.2
1,590,318	-		RR42_RS07435	0.29	+0.3
1,590,707	+		RR42_RS07435	0.57	+0.8
1,590,763	+		RR42_RS07435	0.61	-0.2
1,590,763	+		RR42_RS07435	0.61	-0.7
1,590,763	+		RR42_RS07435	0.61	+0.6
1,590,763	+				-0.2
1,590,764	-		RR42_RS07435	0.61	-0.3
1,590,764	-		RR42_RS07435	0.61	+0.1
1,590,767	+		RR42_RS07435	0.61	+1.3
1,590,767	+		RR42_RS07435	0.61	+0.3
1,590,767	+		RR42_RS07435	0.61	-0.5
1,590,767	+		RR42_RS07435	0.61	+0.4
1,590,767	+		RR42_RS07435	0.61	+0.2
1,590,767	+		RR42_RS07435	0.61	+2.4
1,590,768	-		RR42_RS07435	0.61	-1.2
1,590,768	-		RR42_RS07435	0.61	-0.4
1,590,872	+		RR42_RS07435	0.69	+0.3
1,590,945	-		RR42_RS07435	0.74	-1.0
1,590,945	-		RR42_RS07435	0.74	-0.4
1,591,143	+		RR42_RS07435	0.88	-0.7
1,591,144	-		RR42_RS07435	0.88	+0.1
1,591,145	+		RR42_RS07435	0.88	-2.2
1,591,145	+		RR42_RS07435	0.88	-0.6
1,591,146	-		RR42_RS07435	0.88	-0.2
1,591,146	-		RR42_RS07435	0.88	+0.3
1,591,146	-		RR42_RS07435	0.88	-0.2
1,591,292	+				-2.0
1,591,293	-				-0.2
1,591,293	-				-0.2
1,591,293	-				-0.4
1,591,505	+		RR42_RS07440	0.69	+0.1
1,591,519	-		RR42_RS07440	0.74	+1.6
1,591,519	-		RR42_RS07440	0.74	+0.8
1,592,100	-		RR42_RS07445	0.53	-2.0
1,592,550	+				-1.2