Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06740

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,462,903	+				-0.1
1,462,990	-				-1.3
1,462,990	-				+0.6
1,463,003	+				-0.6
1,463,007	+				+0.2
1,463,548	-				+0.6
1,463,569	-				-0.4
1,463,698	+				-3.4
1,463,699	-				-0.7
1,463,701	-				-0.8
1,463,701	-				+0.8
1,463,710	+				-0.3
1,463,727	-				+0.3
1,463,729	-				+1.3
1,463,798	+		RR42_RS06740	0.11	-3.5
1,463,798	+		RR42_RS06740	0.11	-2.3
1,463,798	+		RR42_RS06740	0.11	-2.6
1,463,915	+		RR42_RS06740	0.52	-1.7
1,463,978	-		RR42_RS06740	0.74	+0.1
1,464,063	-				-1.1
1,464,109	+				-0.1
1,464,110	-				+0.6
1,464,110	-				-1.6
1,464,127	+				+0.9
1,464,128	-				+0.9
1,464,213	+				+0.5
1,464,214	-				+0.3
1,464,214	-				-0.5
1,464,235	-		RR42_RS06745	0.12	+1.0
1,464,249	+		RR42_RS06745	0.18	+0.6
1,464,256	+		RR42_RS06745	0.21	+0.2
1,464,261	+		RR42_RS06745	0.23	-1.4
1,464,273	+		RR42_RS06745	0.28	+0.5
1,464,274	-		RR42_RS06745	0.28	+0.1
1,464,364	+		RR42_RS06745	0.64	+0.0
1,464,375	-		RR42_RS06745	0.69	-0.4
1,464,383	-				+0.9
1,464,576	+		RR42_RS06750	0.56	-2.3
1,464,634	+		RR42_RS06750	0.82	+0.2
1,464,634	+		RR42_RS06750	0.82	-0.4
1,464,634	+		RR42_RS06750	0.82	-1.7
1,464,635	-		RR42_RS06750	0.83	-0.4
1,464,635	-		RR42_RS06750	0.83	-0.2
1,464,635	-		RR42_RS06750	0.83	+0.4
1,464,793	+				-2.5
1,464,990	+				+0.5
1,464,991	-				+0.3
1,465,040	-				-1.0
1,465,040	-				+1.3
1,465,048	+				+0.9
1,465,048	+				+1.1
1,465,049	-				-0.5