Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06310

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,384,715	+				-0.3
1,384,776	+				-1.2
1,384,824	-				+1.4
1,384,962	-		RR42_RS06305	0.11	-0.5
1,385,001	-		RR42_RS06305	0.17	-0.3
1,385,001	-		RR42_RS06305	0.17	-1.1
1,385,001	-		RR42_RS06305	0.17	-0.3
1,385,001	-		RR42_RS06305	0.17	+0.2
1,385,081	+		RR42_RS06305	0.29	+0.7
1,385,081	+		RR42_RS06305	0.29	+0.4
1,385,082	-		RR42_RS06305	0.29	-0.4
1,385,082	-		RR42_RS06305	0.29	+1.7
1,385,082	-		RR42_RS06305	0.29	-0.8
1,385,082	-		RR42_RS06305	0.29	-0.9
1,385,082	-		RR42_RS06305	0.29	+0.2
1,385,207	+		RR42_RS06305	0.49	+1.2
1,385,207	+		RR42_RS06305	0.49	+0.9
1,385,225	+		RR42_RS06305	0.52	+0.3
1,385,226	-		RR42_RS06305	0.52	-1.4
1,385,226	-		RR42_RS06305	0.52	-0.2
1,385,516	+				-0.1
1,385,517	-				-0.3
1,385,517	-				+0.1
1,385,517	-				+0.6
1,385,686	+				+1.4
1,386,659	+				+0.4
1,386,660	-				-0.2
1,386,661	+				+0.1
1,386,662	-				-0.4
1,386,662	-				+0.4
1,387,014	+		RR42_RS06315	0.37	-2.1
1,387,014	+		RR42_RS06315	0.37	-1.1
1,387,014	+		RR42_RS06315	0.37	+0.5
1,387,015	-		RR42_RS06315	0.37	-0.8
1,387,071	-		RR42_RS06315	0.43	-1.0
1,387,301	+		RR42_RS06315	0.66	+0.6
1,387,400	+		RR42_RS06315	0.75	-0.4
1,387,401	-		RR42_RS06315	0.76	-0.6