Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04705

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
1,047,971	+		RR42_RS04700	0.57	-2.1
1,048,313	+		RR42_RS04700	0.81	-3.0
1,048,472	+				+2.0
1,048,472	+				-1.3
1,048,473	-				-2.5
1,048,597	-				+1.3
1,048,800	-		RR42_RS04705	0.12	+0.3
1,048,850	+		RR42_RS04705	0.20	+0.4
1,048,889	+		RR42_RS04705	0.26	-0.3
1,048,890	-		RR42_RS04705	0.27	+0.2
1,048,890	-		RR42_RS04705	0.27	-0.9
1,048,890	-		RR42_RS04705	0.27	+0.2
1,048,890	-		RR42_RS04705	0.27	+0.3
1,049,180	+		RR42_RS04705	0.74	+0.0
1,049,259	-		RR42_RS04705	0.87	+0.6
1,049,259	-		RR42_RS04705	0.87	+0.2
1,049,315	+				-1.0
1,049,316	-				-1.5
1,049,316	-				+0.7
1,049,325	+				-0.5
1,049,325	+				+0.8
1,049,325	+				+0.0
1,049,326	-				-0.2
1,049,351	-				-2.1
1,049,400	+				-0.9
1,049,400	+				-0.1
1,049,457	-				+1.4
1,049,772	+		RR42_RS04710	0.70	-0.7
1,049,772	+		RR42_RS04710	0.70	-0.7
1,049,773	-		RR42_RS04710	0.70	-1.1
1,049,773	-		RR42_RS04710	0.70	-1.0
1,050,173	+		RR42_RS04715	0.31	-1.2