Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04055

Experiment: R2A with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Doxycycline hyclate 0.0001 mg/ml
897,433	-		RR42_RS04050	0.18	+0.1
897,881	+		RR42_RS04050	0.80	+0.2
897,973	+				-0.7
898,026	+				-0.4
898,027	-				+0.3
898,063	-				+0.4
898,242	-				-0.1
898,243	+				+1.3
898,243	+				-0.4
898,545	+		RR42_RS04055	0.56	-1.0
898,546	-		RR42_RS04055	0.57	+1.4
898,778	+				+1.1
898,779	-				+1.3
898,779	-				+1.1
898,820	+				+0.5
898,821	-				+0.2
898,821	-				+0.8
898,859	+				+0.1
898,875	+				+1.3
899,071	+				-0.3
899,072	-				-1.7
899,212	+				+0.7
899,212	+				+0.7
899,212	+				-0.5
899,212	+				+0.4
899,213	-				+1.5
899,213	-				+0.8
899,213	-				+0.9
899,242	+				+1.4
899,242	+				-1.3
899,450	+		RR42_RS04060	0.51	-1.6
899,451	-		RR42_RS04060	0.52	-0.4
899,457	-		RR42_RS04060	0.55	-0.2
899,519	+		RR42_RS04060	0.83	-0.3
899,673	+				+0.6
899,682	+				-0.7
899,717	+				-0.5
899,718	-				+0.5