Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5206 and Pf6N2E2_5207 are separated by 488 nucleotides Pf6N2E2_5207 and Pf6N2E2_5208 overlap by 12 nucleotides
Pf6N2E2_5206 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 6,006,620 to 6,007,363
_5206
Pf6N2E2_5207 - hypothetical protein, at 6,007,852 to 6,008,001
_5207
Pf6N2E2_5208 - Glycine cleavage system transcriptional activator GcvA, at 6,007,990 to 6,008,922
_5208
Position (kb)
6007
6008
6009 Strain fitness (log2 ratio)
-2
-1
0
1 at 6006.923 kb on + strand, within Pf6N2E2_5206 at 6006.923 kb on + strand, within Pf6N2E2_5206 at 6006.923 kb on + strand, within Pf6N2E2_5206 at 6006.923 kb on + strand, within Pf6N2E2_5206 at 6006.924 kb on - strand, within Pf6N2E2_5206 at 6006.924 kb on - strand, within Pf6N2E2_5206 at 6006.924 kb on - strand, within Pf6N2E2_5206 at 6006.934 kb on + strand, within Pf6N2E2_5206 at 6006.934 kb on + strand, within Pf6N2E2_5206 at 6006.934 kb on + strand, within Pf6N2E2_5206 at 6006.934 kb on + strand, within Pf6N2E2_5206 at 6006.934 kb on + strand, within Pf6N2E2_5206 at 6006.934 kb on + strand, within Pf6N2E2_5206 at 6006.935 kb on - strand, within Pf6N2E2_5206 at 6006.935 kb on - strand, within Pf6N2E2_5206 at 6006.935 kb on - strand, within Pf6N2E2_5206 at 6006.970 kb on - strand, within Pf6N2E2_5206 at 6006.970 kb on - strand, within Pf6N2E2_5206 at 6006.970 kb on - strand, within Pf6N2E2_5206 at 6007.006 kb on + strand, within Pf6N2E2_5206 at 6007.007 kb on - strand, within Pf6N2E2_5206 at 6007.206 kb on - strand, within Pf6N2E2_5206 at 6007.214 kb on + strand, within Pf6N2E2_5206 at 6007.214 kb on + strand, within Pf6N2E2_5206 at 6007.214 kb on + strand, within Pf6N2E2_5206 at 6007.214 kb on + strand, within Pf6N2E2_5206 at 6007.214 kb on + strand, within Pf6N2E2_5206 at 6007.215 kb on - strand, within Pf6N2E2_5206 at 6007.313 kb on + strand at 6007.313 kb on + strand at 6007.313 kb on + strand at 6007.313 kb on + strand at 6007.314 kb on - strand at 6007.314 kb on - strand at 6007.314 kb on - strand at 6007.314 kb on - strand at 6007.314 kb on - strand at 6007.332 kb on + strand at 6007.333 kb on - strand at 6007.333 kb on - strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.410 kb on + strand at 6007.411 kb on - strand at 6007.411 kb on - strand at 6007.411 kb on - strand at 6007.411 kb on - strand at 6007.417 kb on - strand at 6007.417 kb on - strand at 6007.434 kb on + strand at 6007.617 kb on + strand at 6007.617 kb on + strand at 6007.617 kb on + strand at 6007.617 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.621 kb on + strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.622 kb on - strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.625 kb on + strand at 6007.626 kb on - strand at 6007.626 kb on - strand at 6007.626 kb on - strand at 6007.626 kb on - strand at 6007.626 kb on - strand at 6007.629 kb on + strand at 6007.629 kb on + strand at 6007.629 kb on + strand at 6007.629 kb on + strand at 6007.629 kb on + strand at 6007.629 kb on + strand at 6007.629 kb on + strand at 6007.630 kb on - strand at 6007.630 kb on - strand at 6007.630 kb on - strand at 6007.630 kb on - strand at 6007.734 kb on + strand at 6007.762 kb on + strand at 6007.763 kb on - strand at 6007.763 kb on - strand at 6007.798 kb on - strand at 6007.798 kb on - strand at 6007.798 kb on - strand at 6007.827 kb on + strand at 6007.827 kb on + strand at 6007.872 kb on - strand, within Pf6N2E2_5207 at 6007.913 kb on + strand, within Pf6N2E2_5207 at 6007.991 kb on + strand at 6007.991 kb on + strand at 6007.991 kb on + strand at 6007.992 kb on - strand at 6007.992 kb on - strand at 6008.056 kb on + strand at 6008.057 kb on - strand at 6008.078 kb on + strand at 6008.087 kb on + strand, within Pf6N2E2_5208 at 6008.088 kb on - strand, within Pf6N2E2_5208 at 6008.088 kb on - strand, within Pf6N2E2_5208 at 6008.088 kb on - strand, within Pf6N2E2_5208 at 6008.088 kb on - strand, within Pf6N2E2_5208 at 6008.088 kb on - strand, within Pf6N2E2_5208 at 6008.090 kb on + strand, within Pf6N2E2_5208 at 6008.090 kb on + strand, within Pf6N2E2_5208 at 6008.091 kb on - strand, within Pf6N2E2_5208 at 6008.091 kb on - strand, within Pf6N2E2_5208 at 6008.091 kb on - strand, within Pf6N2E2_5208 at 6008.091 kb on - strand, within Pf6N2E2_5208 at 6008.207 kb on - strand, within Pf6N2E2_5208 at 6008.271 kb on + strand, within Pf6N2E2_5208 at 6008.271 kb on + strand, within Pf6N2E2_5208 at 6008.272 kb on - strand, within Pf6N2E2_5208 at 6008.332 kb on + strand, within Pf6N2E2_5208 at 6008.332 kb on + strand, within Pf6N2E2_5208 at 6008.332 kb on + strand, within Pf6N2E2_5208 at 6008.332 kb on + strand, within Pf6N2E2_5208 at 6008.333 kb on - strand, within Pf6N2E2_5208 at 6008.333 kb on - strand, within Pf6N2E2_5208 at 6008.333 kb on - strand, within Pf6N2E2_5208 at 6008.333 kb on - strand, within Pf6N2E2_5208 at 6008.333 kb on - strand, within Pf6N2E2_5208 at 6008.333 kb on - strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.542 kb on + strand, within Pf6N2E2_5208 at 6008.543 kb on - strand, within Pf6N2E2_5208 at 6008.543 kb on - strand, within Pf6N2E2_5208 at 6008.543 kb on - strand, within Pf6N2E2_5208 at 6008.543 kb on - strand, within Pf6N2E2_5208 at 6008.543 kb on - strand, within Pf6N2E2_5208 at 6008.543 kb on - strand, within Pf6N2E2_5208 at 6008.543 kb on - strand, within Pf6N2E2_5208 at 6008.628 kb on + strand, within Pf6N2E2_5208 at 6008.629 kb on - strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.641 kb on + strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.642 kb on - strand, within Pf6N2E2_5208 at 6008.749 kb on - strand, within Pf6N2E2_5208 at 6008.778 kb on + strand, within Pf6N2E2_5208 at 6008.778 kb on + strand, within Pf6N2E2_5208 at 6008.778 kb on + strand, within Pf6N2E2_5208 at 6008.779 kb on - strand, within Pf6N2E2_5208 at 6008.779 kb on - strand, within Pf6N2E2_5208 at 6008.799 kb on + strand, within Pf6N2E2_5208 at 6008.799 kb on + strand, within Pf6N2E2_5208 at 6008.903 kb on - strand at 6008.907 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 6,006,923 + Pf6N2E2_5206 0.41 -0.4 6,006,923 + Pf6N2E2_5206 0.41 -0.2 6,006,923 + Pf6N2E2_5206 0.41 +0.7 6,006,923 + Pf6N2E2_5206 0.41 -0.1 6,006,924 - Pf6N2E2_5206 0.41 +1.1 6,006,924 - Pf6N2E2_5206 0.41 -0.1 6,006,924 - Pf6N2E2_5206 0.41 +0.2 6,006,934 + Pf6N2E2_5206 0.42 +0.1 6,006,934 + Pf6N2E2_5206 0.42 +0.3 6,006,934 + Pf6N2E2_5206 0.42 +0.4 6,006,934 + Pf6N2E2_5206 0.42 -1.8 6,006,934 + Pf6N2E2_5206 0.42 +0.8 6,006,934 + Pf6N2E2_5206 0.42 +0.4 6,006,935 - Pf6N2E2_5206 0.42 -0.5 6,006,935 - Pf6N2E2_5206 0.42 +1.6 6,006,935 - Pf6N2E2_5206 0.42 +1.2 6,006,970 - Pf6N2E2_5206 0.47 +0.4 6,006,970 - Pf6N2E2_5206 0.47 +0.4 6,006,970 - Pf6N2E2_5206 0.47 -0.2 6,007,006 + Pf6N2E2_5206 0.52 +0.5 6,007,007 - Pf6N2E2_5206 0.52 +0.0 6,007,206 - Pf6N2E2_5206 0.79 +0.0 6,007,214 + Pf6N2E2_5206 0.80 +0.1 6,007,214 + Pf6N2E2_5206 0.80 +0.4 6,007,214 + Pf6N2E2_5206 0.80 +0.3 6,007,214 + Pf6N2E2_5206 0.80 +1.1 6,007,214 + Pf6N2E2_5206 0.80 -0.2 6,007,215 - Pf6N2E2_5206 0.80 +0.5 6,007,313 + -1.1 6,007,313 + -0.4 6,007,313 + +0.3 6,007,313 + +0.5 6,007,314 - +0.6 6,007,314 - +0.1 6,007,314 - +0.0 6,007,314 - -0.7 6,007,314 - +0.8 6,007,332 + +0.2 6,007,333 - -0.1 6,007,333 - +0.2 6,007,410 + -1.2 6,007,410 + +0.5 6,007,410 + +0.5 6,007,410 + +0.6 6,007,410 + +0.6 6,007,410 + +0.6 6,007,410 + +0.7 6,007,410 + +0.2 6,007,410 + +0.5 6,007,410 + +0.7 6,007,411 - +0.6 6,007,411 - +0.4 6,007,411 - -0.1 6,007,411 - +0.0 6,007,417 - -0.1 6,007,417 - -1.2 6,007,434 + +0.2 6,007,617 + -0.1 6,007,617 + +0.4 6,007,617 + +0.9 6,007,617 + +0.1 6,007,621 + +0.4 6,007,621 + +0.2 6,007,621 + -1.8 6,007,621 + -2.5 6,007,621 + +0.6 6,007,621 + -0.5 6,007,621 + +0.5 6,007,621 + +0.4 6,007,621 + +1.6 6,007,621 + -1.5 6,007,621 + -0.0 6,007,621 + +0.2 6,007,621 + +1.5 6,007,621 + +0.8 6,007,621 + -0.0 6,007,621 + +0.2 6,007,621 + -0.0 6,007,621 + +0.5 6,007,621 + -0.8 6,007,621 + +0.2 6,007,621 + -0.9 6,007,621 + -0.4 6,007,621 + +0.8 6,007,621 + +0.1 6,007,621 + -0.0 6,007,621 + -0.4 6,007,621 + +0.4 6,007,621 + -0.2 6,007,621 + +1.6 6,007,622 - -0.3 6,007,622 - +1.2 6,007,622 - -1.0 6,007,622 - +0.7 6,007,622 - +0.9 6,007,622 - -0.1 6,007,622 - -0.2 6,007,622 - -1.0 6,007,622 - -0.0 6,007,622 - +0.1 6,007,622 - +0.5 6,007,625 + -0.3 6,007,625 + -0.3 6,007,625 + +0.7 6,007,625 + -0.1 6,007,625 + +0.9 6,007,625 + +0.0 6,007,625 + -0.2 6,007,625 + +0.0 6,007,625 + -0.5 6,007,625 + +1.0 6,007,625 + +0.2 6,007,625 + +0.6 6,007,626 - +0.2 6,007,626 - +1.2 6,007,626 - +1.4 6,007,626 - +0.6 6,007,626 - +0.9 6,007,629 + -0.5 6,007,629 + -0.8 6,007,629 + +0.2 6,007,629 + -0.1 6,007,629 + -0.4 6,007,629 + -0.7 6,007,629 + +0.0 6,007,630 - +0.7 6,007,630 - -0.0 6,007,630 - -2.1 6,007,630 - -1.0 6,007,734 + -0.6 6,007,762 + +0.4 6,007,763 - +0.2 6,007,763 - -0.3 6,007,798 - +0.2 6,007,798 - +0.8 6,007,798 - +0.2 6,007,827 + -0.6 6,007,827 + -0.0 6,007,872 - Pf6N2E2_5207 0.13 +0.4 6,007,913 + Pf6N2E2_5207 0.41 -0.7 6,007,991 + +0.6 6,007,991 + -0.3 6,007,991 + -0.0 6,007,992 - -0.2 6,007,992 - +0.6 6,008,056 + +0.1 6,008,057 - +0.0 6,008,078 + +1.1 6,008,087 + Pf6N2E2_5208 0.10 +0.1 6,008,088 - Pf6N2E2_5208 0.11 +0.9 6,008,088 - Pf6N2E2_5208 0.11 -0.1 6,008,088 - Pf6N2E2_5208 0.11 +0.7 6,008,088 - Pf6N2E2_5208 0.11 +1.4 6,008,088 - Pf6N2E2_5208 0.11 +0.5 6,008,090 + Pf6N2E2_5208 0.11 +0.2 6,008,090 + Pf6N2E2_5208 0.11 +0.5 6,008,091 - Pf6N2E2_5208 0.11 -0.5 6,008,091 - Pf6N2E2_5208 0.11 -0.5 6,008,091 - Pf6N2E2_5208 0.11 +0.5 6,008,091 - Pf6N2E2_5208 0.11 +1.4 6,008,207 - Pf6N2E2_5208 0.23 -0.2 6,008,271 + Pf6N2E2_5208 0.30 +0.0 6,008,271 + Pf6N2E2_5208 0.30 -0.5 6,008,272 - Pf6N2E2_5208 0.30 -1.5 6,008,332 + Pf6N2E2_5208 0.37 +0.6 6,008,332 + Pf6N2E2_5208 0.37 -1.1 6,008,332 + Pf6N2E2_5208 0.37 +0.2 6,008,332 + Pf6N2E2_5208 0.37 +0.3 6,008,333 - Pf6N2E2_5208 0.37 -0.1 6,008,333 - Pf6N2E2_5208 0.37 +0.2 6,008,333 - Pf6N2E2_5208 0.37 +0.3 6,008,333 - Pf6N2E2_5208 0.37 +0.0 6,008,333 - Pf6N2E2_5208 0.37 +0.6 6,008,333 - Pf6N2E2_5208 0.37 +0.4 6,008,542 + Pf6N2E2_5208 0.59 +0.5 6,008,542 + Pf6N2E2_5208 0.59 +0.8 6,008,542 + Pf6N2E2_5208 0.59 -0.2 6,008,542 + Pf6N2E2_5208 0.59 -0.9 6,008,542 + Pf6N2E2_5208 0.59 +1.3 6,008,542 + Pf6N2E2_5208 0.59 -0.2 6,008,542 + Pf6N2E2_5208 0.59 -0.4 6,008,542 + Pf6N2E2_5208 0.59 +0.3 6,008,542 + Pf6N2E2_5208 0.59 -0.4 6,008,542 + Pf6N2E2_5208 0.59 +0.4 6,008,543 - Pf6N2E2_5208 0.59 +0.6 6,008,543 - Pf6N2E2_5208 0.59 -0.2 6,008,543 - Pf6N2E2_5208 0.59 +0.0 6,008,543 - Pf6N2E2_5208 0.59 -0.4 6,008,543 - Pf6N2E2_5208 0.59 +0.1 6,008,543 - Pf6N2E2_5208 0.59 -0.2 6,008,543 - Pf6N2E2_5208 0.59 +0.7 6,008,628 + Pf6N2E2_5208 0.68 -0.3 6,008,629 - Pf6N2E2_5208 0.68 -0.3 6,008,641 + Pf6N2E2_5208 0.70 -1.0 6,008,641 + Pf6N2E2_5208 0.70 -0.5 6,008,641 + Pf6N2E2_5208 0.70 -0.6 6,008,641 + Pf6N2E2_5208 0.70 +1.5 6,008,641 + Pf6N2E2_5208 0.70 +0.4 6,008,641 + Pf6N2E2_5208 0.70 +0.6 6,008,641 + Pf6N2E2_5208 0.70 +0.6 6,008,641 + Pf6N2E2_5208 0.70 -0.4 6,008,641 + Pf6N2E2_5208 0.70 -0.6 6,008,642 - Pf6N2E2_5208 0.70 +0.2 6,008,642 - Pf6N2E2_5208 0.70 +0.7 6,008,642 - Pf6N2E2_5208 0.70 +0.2 6,008,642 - Pf6N2E2_5208 0.70 +0.8 6,008,642 - Pf6N2E2_5208 0.70 +0.5 6,008,642 - Pf6N2E2_5208 0.70 +0.2 6,008,642 - Pf6N2E2_5208 0.70 +1.1 6,008,642 - Pf6N2E2_5208 0.70 +0.3 6,008,642 - Pf6N2E2_5208 0.70 -0.2 6,008,642 - Pf6N2E2_5208 0.70 -0.1 6,008,642 - Pf6N2E2_5208 0.70 +0.9 6,008,642 - Pf6N2E2_5208 0.70 +0.2 6,008,749 - Pf6N2E2_5208 0.81 -0.2 6,008,778 + Pf6N2E2_5208 0.84 -1.0 6,008,778 + Pf6N2E2_5208 0.84 +0.1 6,008,778 + Pf6N2E2_5208 0.84 -0.5 6,008,779 - Pf6N2E2_5208 0.85 +1.1 6,008,779 - Pf6N2E2_5208 0.85 +0.6 6,008,799 + Pf6N2E2_5208 0.87 +0.9 6,008,799 + Pf6N2E2_5208 0.87 +0.7 6,008,903 - -0.5 6,008,907 - +0.6
Or see this region's nucleotide sequence