Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1238

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,415,211	+				+0.9
1,415,260	+				+0.3
1,415,260	+				-1.0
1,415,260	+				-0.8
1,415,261	-				+0.2
1,415,261	-				-0.6
1,415,261	-				-0.1
1,415,261	-				-0.7
1,415,261	-				+0.9
1,415,261	-				-1.0
1,415,262	+				-0.8
1,415,262	+				-0.5
1,415,262	+				-0.3
1,415,262	+				+1.1
1,415,262	+				-1.1
1,415,262	+				+0.6
1,415,262	+				+0.3
1,415,262	+				-1.1
1,415,263	-				+0.9
1,415,263	-				-0.8
1,415,263	-				+0.3
1,415,263	-				+0.8
1,415,263	-				-0.8
1,415,263	-				+1.0
1,415,268	-				+1.1
1,415,323	+				+0.2
1,415,323	+				-0.2
1,415,324	-				-0.7
1,415,324	-				+0.1
1,415,324	-				+1.1
1,415,324	-				+0.5
1,415,324	-				-1.7
1,415,328	-				-0.3
1,415,328	-				-0.1
1,415,328	-				+0.5
1,415,335	-				-0.3
1,415,335	-				-0.8
1,415,335	-				-2.0
1,415,391	+				-1.0
1,415,391	+				-1.1
1,415,392	-				-1.2
1,415,392	-				+0.2
1,415,392	-				-1.0
1,415,392	-				+0.5
1,415,392	-				+0.7
1,415,392	-				+0.5
1,415,409	-				+0.2
1,415,409	-				-0.5
1,415,409	-				-1.5
1,415,409	-				-1.7
1,415,409	-				+0.4
1,415,409	-				+0.3
1,415,409	-				-0.5
1,415,409	-				-1.0
1,415,432	+				-1.7
1,415,432	+				-0.8
1,415,433	-				-2.2
1,415,484	-		Pf1N1B4_1238	0.11	-0.1
1,415,484	-		Pf1N1B4_1238	0.11	-1.1
1,415,598	-		Pf1N1B4_1238	0.18	-1.6
1,415,683	-		Pf1N1B4_1238	0.24	-1.1
1,415,683	-		Pf1N1B4_1238	0.24	+0.5
1,415,684	+		Pf1N1B4_1238	0.24	+1.2
1,415,684	+		Pf1N1B4_1238	0.24	+0.2
1,415,684	+		Pf1N1B4_1238	0.24	-1.8
1,415,684	+		Pf1N1B4_1238	0.24	+0.7
1,415,684	+		Pf1N1B4_1238	0.24	+0.5
1,415,685	-		Pf1N1B4_1238	0.24	-0.8
1,415,685	-		Pf1N1B4_1238	0.24	+0.5
1,415,685	-		Pf1N1B4_1238	0.24	-0.7
1,415,685	-		Pf1N1B4_1238	0.24	-0.7
1,415,685	-		Pf1N1B4_1238	0.24	-0.7
1,415,685	-		Pf1N1B4_1238	0.24	-0.1
1,415,685	-		Pf1N1B4_1238	0.24	-2.5
1,415,685	-		Pf1N1B4_1238	0.24	-0.3
1,415,812	+		Pf1N1B4_1238	0.33	-1.5
1,415,812	+		Pf1N1B4_1238	0.33	-0.7
1,415,812	+		Pf1N1B4_1238	0.33	-0.1
1,415,812	+		Pf1N1B4_1238	0.33	+0.5
1,415,812	+		Pf1N1B4_1238	0.33	+0.9
1,415,812	+		Pf1N1B4_1238	0.33	-1.8
1,415,812	+		Pf1N1B4_1238	0.33	-1.7
1,415,812	+		Pf1N1B4_1238	0.33	-0.2
1,415,813	-		Pf1N1B4_1238	0.33	-0.5
1,415,813	-		Pf1N1B4_1238	0.33	+0.5
1,415,813	-		Pf1N1B4_1238	0.33	-2.0
1,415,813	-		Pf1N1B4_1238	0.33	+0.2
1,415,813	-		Pf1N1B4_1238	0.33	-0.9
1,415,813	-		Pf1N1B4_1238	0.33	-2.0
1,415,813	-		Pf1N1B4_1238	0.33	-0.3
1,415,813	-		Pf1N1B4_1238	0.33	-1.7
1,415,813	-		Pf1N1B4_1238	0.33	-1.8
1,415,813	-		Pf1N1B4_1238	0.33	-1.1
1,415,813	-		Pf1N1B4_1238	0.33	+0.7
1,415,813	-		Pf1N1B4_1238	0.33	-0.8
1,415,813	-		Pf1N1B4_1238	0.33	-0.5
1,415,813	-		Pf1N1B4_1238	0.33	-1.1
1,415,813	-		Pf1N1B4_1238	0.33	-0.1
1,415,813	-		Pf1N1B4_1238	0.33	+0.0
1,415,813	-		Pf1N1B4_1238	0.33	-0.7
1,415,813	-		Pf1N1B4_1238	0.33	-0.6
1,415,813	-		Pf1N1B4_1238	0.33	+1.5
1,415,813	-		Pf1N1B4_1238	0.33	-0.1
1,415,813	-		Pf1N1B4_1238	0.33	+1.1
1,415,813	-		Pf1N1B4_1238	0.33	-2.0
1,415,815	-		Pf1N1B4_1238	0.33	-1.5
1,415,816	+		Pf1N1B4_1238	0.33	-2.0
1,415,816	+		Pf1N1B4_1238	0.33	-1.4
1,415,817	-		Pf1N1B4_1238	0.33	-0.1
1,415,817	-		Pf1N1B4_1238	0.33	-0.1
1,415,817	-		Pf1N1B4_1238	0.33	+1.5
1,415,959	+		Pf1N1B4_1238	0.42	-1.1
1,415,959	+		Pf1N1B4_1238	0.42	+0.5
1,415,960	-		Pf1N1B4_1238	0.42	-0.1
1,415,960	-		Pf1N1B4_1238	0.42	-1.3
1,415,960	-		Pf1N1B4_1238	0.42	-1.1
1,415,960	-				-0.5
1,416,122	+		Pf1N1B4_1238	0.53	+0.5
1,416,123	-		Pf1N1B4_1238	0.53	-1.0
1,416,123	-		Pf1N1B4_1238	0.53	-1.0
1,416,128	+		Pf1N1B4_1238	0.54	-2.0
1,416,129	-		Pf1N1B4_1238	0.54	-1.3
1,416,129	-		Pf1N1B4_1238	0.54	-1.2
1,416,129	-		Pf1N1B4_1238	0.54	-0.9
1,416,312	+		Pf1N1B4_1238	0.66	+0.7
1,416,344	+		Pf1N1B4_1238	0.68	+0.1
1,416,344	+		Pf1N1B4_1238	0.68	-0.3
1,416,344	+		Pf1N1B4_1238	0.68	+1.1
1,416,345	-		Pf1N1B4_1238	0.68	-1.7
1,416,345	-		Pf1N1B4_1238	0.68	-1.1
1,416,345	-		Pf1N1B4_1238	0.68	-1.3
1,416,384	+		Pf1N1B4_1238	0.71	+0.3
1,416,387	+				+3.1
1,416,387	+		Pf1N1B4_1238	0.71	-0.9
1,416,387	+		Pf1N1B4_1238	0.71	-0.7
1,416,388	-		Pf1N1B4_1238	0.71	-0.3
1,416,388	-		Pf1N1B4_1238	0.71	+0.9
1,416,455	+		Pf1N1B4_1238	0.76	-0.4
1,416,869	-				+1.9
1,416,869	-				+0.0
1,416,869	-				+0.0
1,416,869	-				-0.5
1,416,869	-				+0.7
1,416,869	-				-0.5
1,416,870	+				-1.3
1,416,871	-				-2.0
1,416,871	-				-0.8
1,416,871	-				+0.5
1,416,872	+				-1.3
1,416,872	+				+0.5
1,416,872	+				-0.5
1,416,872	+				+0.1
1,416,872	+				-0.4
1,416,872	+				-1.7
1,416,872	+				-1.1
1,416,872	+				+0.5
1,416,872	+				+0.2
1,416,872	+				+1.5
1,416,872	+				-0.5
1,416,872	+				+1.1
1,416,872	+				-0.8
1,416,872	+				-0.8
1,416,872	+				+3.1
1,416,872	+				-1.2
1,416,872	+				+0.5
1,416,872	+				-1.1
1,416,872	+				-1.5
1,416,872	+				-1.0
1,416,872	+				-0.9
1,416,872	+				+0.5
1,416,872	+				+0.3
1,416,873	-				+0.1
1,416,873	-				-0.5
1,416,873	-				-1.6
1,416,873	-				+0.1
1,416,873	-				+0.2
1,416,873	-				-0.8
1,416,873	-				+1.5
1,416,873	-				+0.9
1,416,873	-				-1.2
1,416,873	-				-0.5
1,416,873	-				+0.1
1,416,873	-				-0.4
1,416,873	-				-0.1
1,416,873	-				+1.5
1,416,873	-				-0.1
1,416,873	-				+0.8
1,416,873	-				-1.3
1,416,997	+				+1.5
1,416,997	+				-0.1
1,416,997	+				-0.1
1,416,998	-				+1.1
1,417,093	+		Pf1N1B4_1239	0.15	-0.6
1,417,093	+		Pf1N1B4_1239	0.15	+0.5
1,417,094	-		Pf1N1B4_1239	0.15	-1.3
1,417,097	+		Pf1N1B4_1239	0.16	-2.2
1,417,098	-		Pf1N1B4_1239	0.16	-0.6
1,417,098	-		Pf1N1B4_1239	0.16	-2.0
1,417,098	-		Pf1N1B4_1239	0.16	+0.2
1,417,098	-		Pf1N1B4_1239	0.16	-1.1
1,417,098	-		Pf1N1B4_1239	0.16	+0.2
1,417,098	-		Pf1N1B4_1239	0.16	+0.1
1,417,249	+		Pf1N1B4_1239	0.27	-0.3
1,417,249	+		Pf1N1B4_1239	0.27	+0.0
1,417,249	+		Pf1N1B4_1239	0.27	+0.1
1,417,249	+		Pf1N1B4_1239	0.27	+0.3
1,417,249	+		Pf1N1B4_1239	0.27	+1.0
1,417,250	-		Pf1N1B4_1239	0.27	-0.5
1,417,250	-		Pf1N1B4_1239	0.27	+0.5
1,417,250	-		Pf1N1B4_1239	0.27	-1.3
1,417,312	+		Pf1N1B4_1239	0.32	-1.4
1,417,312	+		Pf1N1B4_1239	0.32	+0.2
1,417,312	+		Pf1N1B4_1239	0.32	-0.1
1,417,312	+		Pf1N1B4_1239	0.32	+0.5
1,417,312	+		Pf1N1B4_1239	0.32	-0.2
1,417,312	+		Pf1N1B4_1239	0.32	-2.6
1,417,313	-		Pf1N1B4_1239	0.32	+0.2
1,417,313	-		Pf1N1B4_1239	0.32	-0.8
1,417,313	-		Pf1N1B4_1239	0.32	-0.5
1,417,313	-		Pf1N1B4_1239	0.32	-0.7
1,417,313	-		Pf1N1B4_1239	0.32	-0.1
1,417,382	+		Pf1N1B4_1239	0.37	-0.0
1,417,382	+		Pf1N1B4_1239	0.37	-0.7
1,417,382	+		Pf1N1B4_1239	0.37	-1.3
1,417,382	+		Pf1N1B4_1239	0.37	-1.1
1,417,382	+		Pf1N1B4_1239	0.37	-1.5
1,417,382	+		Pf1N1B4_1239	0.37	-1.1
1,417,383	-		Pf1N1B4_1239	0.37	+1.3
1,417,383	-		Pf1N1B4_1239	0.37	+0.9
1,417,383	-		Pf1N1B4_1239	0.37	+1.2
1,417,383	-		Pf1N1B4_1239	0.37	-0.3
1,417,383	-		Pf1N1B4_1239	0.37	-0.5
1,417,383	-		Pf1N1B4_1239	0.37	-0.5
1,417,383	-		Pf1N1B4_1239	0.37	-1.5
1,417,383	-		Pf1N1B4_1239	0.37	+0.8
1,417,511	-		Pf1N1B4_1239	0.46	+0.2
1,417,511	-		Pf1N1B4_1239	0.46	-1.5