Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01017

Experiment: L-Glutamic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamic (C)
1,097,191	-		CCNA_01016	0.22	+0.1
1,097,283	+		CCNA_01016	0.32	+0.3
1,097,284	+		CCNA_01016	0.32	+0.4
1,097,294	+		CCNA_01016	0.33	+0.6
1,097,321	+		CCNA_01016	0.36	+0.1
1,097,329	-		CCNA_01016	0.37	+0.3
1,097,376	+		CCNA_01016	0.42	+1.0
1,097,384	-		CCNA_01016	0.43	+0.2
1,097,384	-		CCNA_01016	0.43	-2.2
1,097,391	+		CCNA_01016	0.44	+1.0
1,097,391	+		CCNA_01016	0.44	+0.4
1,097,391	+		CCNA_01016	0.44	+1.2
1,097,396	+		CCNA_01016	0.44	+0.9
1,097,399	-		CCNA_01016	0.44	-2.5
1,097,399	-		CCNA_01016	0.44	+0.8
1,097,401	+		CCNA_01016	0.45	+0.4
1,097,404	-		CCNA_01016	0.45	-0.3
1,097,429	+		CCNA_01016	0.48	+1.2
1,097,437	-		CCNA_01016	0.49	-1.3
1,097,472	-		CCNA_01016	0.52	-0.5
1,097,473	+		CCNA_01016	0.53	+1.6
1,097,476	-		CCNA_01016	0.53	+0.3
1,097,476	-		CCNA_01016	0.53	-1.8
1,097,480	+		CCNA_01016	0.53	+0.1
1,097,495	+		CCNA_01016	0.55	-0.1
1,097,515	+		CCNA_01016	0.57	+0.9
1,097,555	-		CCNA_01016	0.62	+0.4
1,097,569	+		CCNA_01016	0.63	+0.6
1,097,572	-		CCNA_01016	0.63	+0.6
1,097,574	+		CCNA_01016	0.64	-0.1
1,097,589	-		CCNA_01016	0.65	+0.3
1,097,592	+		CCNA_01016	0.66	+0.4
1,097,598	+		CCNA_01016	0.66	+1.2
1,097,600	+		CCNA_01016	0.67	+1.2
1,097,608	-		CCNA_01016	0.67	-0.3
1,097,623	-		CCNA_01016	0.69	+1.0
1,097,660	+				+0.2
1,097,671	+		CCNA_01016	0.74	-0.1
1,097,679	-		CCNA_01016	0.75	-2.6
1,097,689	+		CCNA_01016	0.76	+2.5
1,097,714	+		CCNA_01016	0.79	+0.2
1,097,735	+		CCNA_01016	0.81	+0.7
1,097,803	+		CCNA_01016	0.89	-0.8
1,097,828	+				+1.2
1,097,906	+				+1.0
1,097,906	+				+1.1
1,097,914	-				-1.2
1,097,955	+				-0.1
1,097,963	-				-1.3
1,097,976	+				-0.7
1,097,976	+				-0.3
1,097,981	-				-1.5
1,097,984	-				-1.5
1,098,001	-				-0.4
1,098,009	-				-0.1
1,098,009	-				-0.0
1,098,019	+				+1.5
1,098,045	+				+0.9
1,098,045	+				+0.9
1,098,074	+				+1.3
1,098,087	-				+0.2
1,098,114	+				+0.9
1,098,122	-				-0.2
1,098,173	+				+0.2
1,098,213	-				-3.0
1,098,270	+				+0.6
1,098,270	+				+1.0
1,098,270	+				+0.8
1,098,271	-				-0.5
1,098,273	-				-1.4
1,098,278	-				+0.9
1,098,291	+				+0.4
1,098,291	+				+2.8
1,098,325	+				+0.5
1,098,333	-				-0.3
1,098,333	-				-1.1
1,098,333	-				+0.6
1,098,333	-				-1.0
1,098,446	-		CCNA_01017	0.17	+0.1
1,098,480	+		CCNA_01017	0.19	-1.4
1,098,480	+		CCNA_01017	0.19	-1.7
1,098,522	+		CCNA_01017	0.22	+0.0
1,098,674	-		CCNA_01017	0.31	+0.2
1,098,697	+		CCNA_01017	0.33	-0.1
1,098,697	+		CCNA_01017	0.33	-1.1
1,098,697	+		CCNA_01017	0.33	-1.0
1,098,697	+		CCNA_01017	0.33	-1.3
1,098,705	+		CCNA_01017	0.33	-1.0
1,098,705	-		CCNA_01017	0.33	-1.4
1,098,705	-		CCNA_01017	0.33	-0.3
1,098,705	-		CCNA_01017	0.33	-0.0
1,098,705	-		CCNA_01017	0.33	-0.9
1,098,705	-		CCNA_01017	0.33	+0.0
1,098,705	-		CCNA_01017	0.33	-1.3
1,098,705	-		CCNA_01017	0.33	-0.9
1,098,705	-		CCNA_01017	0.33	+0.2
1,098,714	+		CCNA_01017	0.34	-0.5
1,098,724	+		CCNA_01017	0.34	-0.6
1,098,737	+		CCNA_01017	0.35	+0.0
1,098,737	+		CCNA_01017	0.35	-1.3
1,098,747	+		CCNA_01017	0.36	+0.0
1,098,755	-		CCNA_01017	0.36	-2.3
1,098,755	-		CCNA_01017	0.36	+0.4
1,098,803	+		CCNA_01017	0.39	+0.4
1,098,871	-		CCNA_01017	0.43	-0.6
1,098,877	-		CCNA_01017	0.44	+0.3
1,098,915	+		CCNA_01017	0.46	-1.3
1,098,915	+		CCNA_01017	0.46	-1.0
1,098,915	+		CCNA_01017	0.46	+0.2
1,098,923	-		CCNA_01017	0.47	-0.5
1,098,932	+		CCNA_01017	0.47	+0.1
1,098,940	-		CCNA_01017	0.48	-0.4
1,098,940	-		CCNA_01017	0.48	-2.9
1,099,012	-				+0.6
1,099,017	-		CCNA_01017	0.53	+0.8
1,099,032	+		CCNA_01017	0.54	-0.0
1,099,040	-		CCNA_01017	0.54	+0.1
1,099,044	+		CCNA_01017	0.54	-2.0
1,099,052	-		CCNA_01017	0.55	-1.7
1,099,073	+		CCNA_01017	0.56	+1.0
1,099,095	+		CCNA_01017	0.58	-0.4
1,099,095	+		CCNA_01017	0.58	-0.2
1,099,095	+		CCNA_01017	0.58	-0.4
1,099,103	-		CCNA_01017	0.58	-0.2
1,099,111	-		CCNA_01017	0.59	-2.9
1,099,165	-		CCNA_01017	0.62	+1.1
1,099,233	+		CCNA_01017	0.66	-0.6
1,099,284	-		CCNA_01017	0.69	-1.8
1,099,306	+		CCNA_01017	0.71	-1.7
1,099,306	+		CCNA_01017	0.71	+0.9
1,099,306	+		CCNA_01017	0.71	+0.5
1,099,339	+		CCNA_01017	0.73	-0.4
1,099,401	+		CCNA_01017	0.77	-0.5
1,099,427	+		CCNA_01017	0.78	-0.1
1,099,435	-		CCNA_01017	0.79	-2.5
1,099,447	-		CCNA_01017	0.80	-2.1
1,099,471	+		CCNA_01017	0.81	+0.9
1,099,471	+		CCNA_01017	0.81	+1.7
1,099,479	-		CCNA_01017	0.82	-1.0
1,099,486	+		CCNA_01017	0.82	-1.4
1,099,486	+		CCNA_01017	0.82	+0.4
1,099,492	-		CCNA_01017	0.82	-1.2
1,099,518	+		CCNA_01017	0.84	+1.2
1,099,567	+		CCNA_01017	0.87	-1.2
1,099,651	+				+0.1
1,099,659	-				-1.5
1,099,659	-				-0.4
1,099,659	-				-0.1
1,099,660	+				+0.0
1,099,660	+				+0.3
1,099,685	+				+0.1
1,099,746	-				+0.7
1,099,746	-				+0.1
1,099,746	-				-2.4
1,099,748	-				-0.7
1,099,757	+				-0.7
1,099,794	-				-0.9
1,099,806	+				+0.1
1,099,837	+				-0.7
1,099,866	-				-0.2
1,099,888	-				+0.6
1,099,910	+				-0.3
1,099,912	+				+2.2
1,099,912	+				-0.6
1,099,920	-				+0.6
1,099,920	-				+0.6
1,099,920	-				+0.7
1,099,920	-				+0.6
1,099,920	-				+0.8
1,099,920	-				+1.0
1,099,925	-				+0.5
1,100,015	+		CCNA_01018	0.13	-0.9
1,100,082	+		CCNA_01018	0.20	-1.6
1,100,090	-		CCNA_01018	0.21	+0.4
1,100,090	-		CCNA_01018	0.21	-0.5
1,100,116	-		CCNA_01018	0.24	+0.5
1,100,117	+		CCNA_01018	0.24	-0.5
1,100,117	+		CCNA_01018	0.24	-1.0
1,100,139	-		CCNA_01018	0.26	+0.4
1,100,139	-		CCNA_01018	0.26	+1.1
1,100,189	+		CCNA_01018	0.31	+1.0
1,100,194	+				+0.6
1,100,197	-		CCNA_01018	0.32	-0.8
1,100,197	-		CCNA_01018	0.32	-0.3
1,100,198	+		CCNA_01018	0.32	-0.5
1,100,202	-		CCNA_01018	0.33	+0.4
1,100,207	-		CCNA_01018	0.33	-0.0
1,100,211	+		CCNA_01018	0.34	-1.0
1,100,252	-		CCNA_01018	0.38	+0.4
1,100,294	-		CCNA_01018	0.43	+1.5
1,100,313	-		CCNA_01018	0.45	-0.4
1,100,320	+		CCNA_01018	0.46	-1.2
1,100,351	+		CCNA_01018	0.49	+1.5
1,100,352	+		CCNA_01018	0.49	+0.9
1,100,352	+		CCNA_01018	0.49	+1.1
1,100,360	-		CCNA_01018	0.50	+0.2
1,100,360	-		CCNA_01018	0.50	-1.1
1,100,384	-		CCNA_01018	0.53	+0.7
1,100,393	-		CCNA_01018	0.54	-1.3
1,100,438	-		CCNA_01018	0.58	+0.2
1,100,441	+		CCNA_01018	0.59	-0.4
1,100,444	-		CCNA_01018	0.59	+0.5
1,100,449	-		CCNA_01018	0.60	+0.4
1,100,449	-		CCNA_01018	0.60	-0.5
1,100,496	-		CCNA_01018	0.65	-0.7
1,100,496	-		CCNA_01018	0.65	+0.3
1,100,498	-		CCNA_01018	0.65	-1.9
1,100,632	-		CCNA_01018	0.79	-0.9
1,100,642	+		CCNA_01018	0.81	-0.9
1,100,712	-		CCNA_01018	0.88	+0.3
1,100,722	-		CCNA_01018	0.89	-0.5
1,100,751	+				+0.2
1,100,759	-				+0.0