Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11235

Experiment: R2A with Chlorite 0.08 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chlorite 0.08 mM
2,777,354	-				-0.2
2,777,394	+				-0.6
2,777,395	-				+2.0
2,777,410	-				-0.6
2,777,454	+				-0.7
2,777,535	-				+0.3
2,777,537	-				-0.0
2,777,541	+				-0.9
2,777,542	-				+0.3
2,777,563	+				+0.0
2,777,590	+		CA265_RS11230	0.13	-0.8
2,777,590	+		CA265_RS11230	0.13	-0.0
2,777,591	-		CA265_RS11230	0.13	+0.9
2,777,800	+		CA265_RS11230	0.38	+0.1
2,777,862	-		CA265_RS11230	0.46	+0.3
2,777,893	+		CA265_RS11230	0.49	-0.9
2,777,917	+		CA265_RS11230	0.52	+0.1
2,777,978	-		CA265_RS11230	0.60	+0.3
2,777,984	-		CA265_RS11230	0.60	-0.1
2,777,984	-		CA265_RS11230	0.60	-0.1
2,778,105	+		CA265_RS11230	0.75	+0.9
2,778,105	+		CA265_RS11230	0.75	+0.1
2,778,105	+				-1.3
2,778,105	+		CA265_RS11230	0.75	+0.9
2,778,106	-		CA265_RS11230	0.75	-1.0
2,778,106	-		CA265_RS11230	0.75	+0.2
2,778,130	-		CA265_RS11230	0.78	-0.0
2,778,157	+		CA265_RS11230	0.81	-0.1
2,778,162	-		CA265_RS11230	0.82	-0.9
2,778,332	+				-0.5
2,778,341	+				-0.3
2,778,341	+				-0.8
2,778,341	+				-0.5
2,778,342	-				-1.0
2,778,342	-				+0.0
2,778,356	+				-0.9
2,778,357	-				-0.0
2,778,357	-				+0.5
2,778,357	-				+0.3
2,778,357	-				-0.0
2,778,357	-				+1.0
2,778,401	-				+1.9
2,778,460	+				-0.3
2,778,465	+				+0.8
2,778,537	+				-0.6
2,778,541	+				-1.0
2,778,552	+				-0.0
2,778,613	-		CA265_RS11235	0.10	-0.5
2,778,618	+		CA265_RS11235	0.10	+0.1
2,778,670	+		CA265_RS11235	0.12	+0.5
2,778,752	+		CA265_RS11235	0.15	-0.3
2,778,753	-		CA265_RS11235	0.15	-0.3
2,778,753	-		CA265_RS11235	0.15	-0.7
2,778,857	+		CA265_RS11235	0.19	-1.0
2,778,858	-		CA265_RS11235	0.19	-0.3
2,778,915	+		CA265_RS11235	0.21	+0.4
2,778,949	-		CA265_RS11235	0.23	-0.1
2,778,949	-		CA265_RS11235	0.23	-0.2
2,778,949	-		CA265_RS11235	0.23	-0.0
2,778,966	-		CA265_RS11235	0.23	+0.6
2,779,004	+		CA265_RS11235	0.25	-0.3
2,779,028	-		CA265_RS11235	0.25	-0.5
2,779,085	+		CA265_RS11235	0.27	+0.0
2,779,114	+		CA265_RS11235	0.29	-0.0
2,779,114	+		CA265_RS11235	0.29	+0.9
2,779,115	-		CA265_RS11235	0.29	-0.1
2,779,115	-		CA265_RS11235	0.29	+0.2
2,779,119	+		CA265_RS11235	0.29	-0.9
2,779,329	-		CA265_RS11235	0.36	-0.1
2,779,361	-		CA265_RS11235	0.38	-0.0
2,779,452	-		CA265_RS11235	0.41	+1.1
2,779,523	+		CA265_RS11235	0.44	+0.1
2,779,532	-		CA265_RS11235	0.44	-0.9
2,779,532	-		CA265_RS11235	0.44	-0.0
2,779,563	-		CA265_RS11235	0.45	+0.3
2,779,570	+		CA265_RS11235	0.45	-0.2
2,779,570	+		CA265_RS11235	0.45	+0.6
2,779,570	+		CA265_RS11235	0.45	-0.1
2,779,571	-		CA265_RS11235	0.45	+0.1
2,779,574	+		CA265_RS11235	0.45	+0.7
2,779,629	+		CA265_RS11235	0.47	+0.4
2,779,700	+		CA265_RS11235	0.50	+0.1
2,779,701	-		CA265_RS11235	0.50	-1.4
2,779,701	-		CA265_RS11235	0.50	+1.0
2,779,726	-		CA265_RS11235	0.51	-0.3
2,779,729	+		CA265_RS11235	0.51	-1.3
2,779,730	-		CA265_RS11235	0.51	-0.4
2,779,733	-		CA265_RS11235	0.51	-0.6
2,779,748	+		CA265_RS11235	0.52	-0.0
2,779,753	-		CA265_RS11235	0.52	-0.0
2,779,814	+		CA265_RS11235	0.54	+0.6
2,779,814	+		CA265_RS11235	0.54	-0.2
2,779,814	+		CA265_RS11235	0.54	-1.1
2,779,886	+		CA265_RS11235	0.57	+0.8
2,779,887	-		CA265_RS11235	0.57	-0.0
2,779,898	+		CA265_RS11235	0.57	+0.1
2,780,043	+		CA265_RS11235	0.63	+0.6
2,780,190	+		CA265_RS11235	0.68	-1.3
2,780,201	+		CA265_RS11235	0.68	-0.0
2,780,201	+		CA265_RS11235	0.68	+3.1
2,780,202	-		CA265_RS11235	0.69	-0.3
2,780,234	-		CA265_RS11235	0.70	-0.5
2,780,258	-		CA265_RS11235	0.71	+0.5
2,780,289	+		CA265_RS11235	0.72	+0.1
2,780,289	+		CA265_RS11235	0.72	+0.3
2,780,290	-		CA265_RS11235	0.72	-0.4
2,780,290	-		CA265_RS11235	0.72	+0.3
2,780,305	+		CA265_RS11235	0.72	-1.1
2,780,376	+		CA265_RS11235	0.75	+0.9
2,780,377	-		CA265_RS11235	0.75	+1.3
2,780,383	+		CA265_RS11235	0.75	-0.1
2,780,383	+		CA265_RS11235	0.75	+1.0
2,780,384	-		CA265_RS11235	0.75	-0.5
2,780,428	+		CA265_RS11235	0.77	-0.7
2,780,428	+		CA265_RS11235	0.77	+1.0
2,780,428	+		CA265_RS11235	0.77	-0.8
2,780,429	-		CA265_RS11235	0.77	+0.1
2,780,652	-		CA265_RS11235	0.85	-1.5
2,780,657	-		CA265_RS11235	0.85	-0.6
2,780,743	+		CA265_RS11235	0.88	+0.9
2,780,788	+				+1.3
2,780,817	-				-0.1
2,780,820	+				-0.4
2,780,839	-				-0.1
2,780,843	+				-0.4
2,780,844	-				+0.7
2,780,844	-				-0.2
2,780,912	+				+0.1
2,780,953	+				-0.1
2,781,042	+				+0.4
2,781,063	+				-3.9
2,781,110	+				+1.1
2,781,111	-				+0.4
2,781,133	-				+0.0
2,781,193	+				-0.3
2,781,242	-				-0.6
2,781,312	+				-0.3
2,781,394	+		CA265_RS11240	0.14	-0.2
2,781,395	-		CA265_RS11240	0.14	-0.4
2,781,408	-		CA265_RS11240	0.16	+0.5
2,781,503	-		CA265_RS11240	0.29	+0.0
2,781,503	-		CA265_RS11240	0.29	-0.5
2,781,505	-		CA265_RS11240	0.29	+1.9
2,781,588	+		CA265_RS11240	0.41	+1.3
2,781,590	+		CA265_RS11240	0.42	-0.2
2,781,590	+		CA265_RS11240	0.42	+0.7
2,781,607	-		CA265_RS11240	0.44	+0.5
2,781,636	-		CA265_RS11240	0.48	+0.4
2,781,650	-		CA265_RS11240	0.50	+0.5
2,781,729	+		CA265_RS11240	0.62	-1.1
2,781,820	-		CA265_RS11240	0.75	+0.3
2,781,833	-		CA265_RS11240	0.76	-0.6
2,781,833	-		CA265_RS11240	0.76	-0.4
2,781,833	-		CA265_RS11240	0.76	+0.1
2,781,833	-		CA265_RS11240	0.76	+0.7
2,781,852	-		CA265_RS11240	0.79	+0.1
2,781,879	-		CA265_RS11240	0.83	+0.6
2,781,938	-				+0.1
2,782,014	-				+0.9
2,782,019	+				+1.4
2,782,041	-				+0.3