Experiment: R2A with Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS01875 and CA265_RS01880 are separated by 5 nucleotides
CA265_RS01875: CA265_RS01875 - hypothetical protein, at 468,592 to 469,029
_RS01875
CA265_RS01880: CA265_RS01880 - phosphoglycerate kinase, at 469,035 to 470,228
_RS01880
Position (kb)
468
469
470 Strain fitness (log2 ratio)
-2
-1
0
1 at 467.605 kb on - strand at 467.605 kb on - strand at 467.608 kb on - strand at 467.614 kb on - strand at 467.615 kb on + strand at 467.615 kb on + strand at 467.615 kb on + strand at 467.616 kb on - strand at 467.656 kb on + strand at 467.656 kb on + strand at 467.663 kb on - strand at 467.786 kb on + strand at 467.787 kb on - strand at 467.792 kb on - strand at 467.876 kb on + strand at 467.928 kb on + strand at 467.948 kb on + strand at 467.954 kb on + strand at 467.956 kb on + strand at 467.956 kb on + strand at 467.957 kb on - strand at 468.030 kb on - strand at 468.117 kb on + strand at 468.194 kb on + strand at 468.286 kb on + strand at 468.286 kb on + strand at 468.287 kb on - strand at 468.288 kb on + strand at 468.288 kb on + strand at 468.289 kb on - strand at 468.289 kb on - strand at 468.289 kb on - strand at 468.362 kb on + strand at 468.534 kb on - strand at 468.537 kb on - strand at 468.578 kb on - strand at 468.578 kb on - strand at 468.620 kb on + strand at 468.620 kb on + strand at 468.719 kb on + strand, within CA265_RS01875 at 468.810 kb on + strand, within CA265_RS01875 at 468.810 kb on + strand, within CA265_RS01875 at 468.885 kb on + strand, within CA265_RS01875 at 468.906 kb on + strand, within CA265_RS01875 at 468.975 kb on + strand, within CA265_RS01875
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Chlorite 0.08 mM remove 467,605 - -0.2 467,605 - +0.6 467,608 - -0.3 467,614 - -0.2 467,615 + -0.2 467,615 + +0.3 467,615 + +0.4 467,616 - -0.0 467,656 + -0.2 467,656 + +0.8 467,663 - +0.1 467,786 + -0.5 467,787 - -0.4 467,792 - -0.4 467,876 + +1.2 467,928 + +0.2 467,948 + +0.3 467,954 + +0.8 467,956 + +0.5 467,956 + +0.1 467,957 - -0.7 468,030 - +0.4 468,117 + +0.6 468,194 + -0.0 468,286 + -0.3 468,286 + -0.9 468,287 - +1.2 468,288 + -0.5 468,288 + +0.1 468,289 - -2.2 468,289 - -0.5 468,289 - -1.4 468,362 + +0.4 468,534 - -0.7 468,537 - -0.6 468,578 - +0.1 468,578 - -0.0 468,620 + -0.3 468,620 + -0.5 468,719 + CA265_RS01875 0.29 -0.9 468,810 + CA265_RS01875 0.50 -0.6 468,810 + CA265_RS01875 0.50 -0.7 468,885 + CA265_RS01875 0.67 -0.6 468,906 + CA265_RS01875 0.72 -0.0 468,975 + CA265_RS01875 0.87 -1.1
Or see this region's nucleotide sequence