Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04044 and SMc04060 are separated by 284 nucleotides SMc04060 and SMc04045 are separated by 432 nucleotides SMc04045 and SMc04046 are separated by 172 nucleotides
SMc04044: SMc04044 - 2-component receiver domain-containing protein, at 3,047,905 to 3,048,267
SMc04044
SMc04060: SMc04060 - tRNA-Val, at 3,048,552 to 3,048,626
SMc04060
SMc04045: SMc04045 - dihydroxy-acid dehydratase, at 3,049,059 to 3,050,897
SMc04045
SMc04046: SMc04046 - hypothetical protein, at 3,051,070 to 3,051,474
SMc04046
Position (kb)
3049
3050
3051 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1
2 at 3048.278 kb on + strand at 3048.278 kb on + strand at 3048.278 kb on + strand at 3048.278 kb on + strand at 3048.278 kb on + strand at 3048.278 kb on + strand at 3048.278 kb on + strand at 3048.279 kb on - strand at 3048.279 kb on - strand at 3048.279 kb on - strand at 3048.279 kb on - strand at 3048.279 kb on - strand at 3048.389 kb on - strand at 3048.446 kb on - strand at 3048.646 kb on + strand at 3048.646 kb on + strand at 3048.647 kb on - strand at 3048.824 kb on - strand at 3048.824 kb on - strand at 3048.948 kb on - strand at 3049.038 kb on - strand at 3049.069 kb on - strand at 3049.163 kb on + strand at 3049.164 kb on - strand at 3049.374 kb on + strand, within SMc04045 at 3049.375 kb on - strand, within SMc04045 at 3049.375 kb on - strand, within SMc04045 at 3049.375 kb on - strand, within SMc04045 at 3049.375 kb on - strand, within SMc04045 at 3049.376 kb on + strand, within SMc04045 at 3049.376 kb on + strand, within SMc04045 at 3049.377 kb on - strand, within SMc04045 at 3049.377 kb on - strand, within SMc04045 at 3049.795 kb on - strand, within SMc04045 at 3049.898 kb on + strand, within SMc04045 at 3049.899 kb on - strand, within SMc04045 at 3049.926 kb on + strand, within SMc04045 at 3049.939 kb on + strand, within SMc04045 at 3050.036 kb on - strand, within SMc04045 at 3050.550 kb on + strand, within SMc04045 at 3050.838 kb on + strand at 3050.838 kb on + strand at 3050.839 kb on - strand at 3051.126 kb on + strand, within SMc04046 at 3051.126 kb on + strand, within SMc04046 at 3051.126 kb on + strand, within SMc04046 at 3051.126 kb on + strand, within SMc04046 at 3051.127 kb on - strand, within SMc04046 at 3051.128 kb on + strand, within SMc04046 at 3051.128 kb on + strand, within SMc04046 at 3051.128 kb on + strand, within SMc04046 at 3051.129 kb on - strand, within SMc04046 at 3051.129 kb on - strand, within SMc04046 at 3051.129 kb on - strand, within SMc04046 at 3051.221 kb on + strand, within SMc04046 at 3051.234 kb on - strand, within SMc04046 at 3051.360 kb on - strand, within SMc04046 at 3051.453 kb on + strand at 3051.453 kb on + strand at 3051.453 kb on + strand at 3051.454 kb on - strand at 3051.454 kb on - strand at 3051.460 kb on - strand at 3051.460 kb on - strand at 3051.460 kb on - strand at 3051.498 kb on + strand at 3051.531 kb on + strand at 3051.531 kb on + strand at 3051.531 kb on + strand at 3051.531 kb on + strand at 3051.545 kb on + strand at 3051.546 kb on - strand at 3051.546 kb on - strand at 3051.568 kb on + strand at 3051.572 kb on - strand at 3051.575 kb on + strand at 3051.576 kb on - strand at 3051.576 kb on - strand at 3051.576 kb on - strand at 3051.576 kb on - strand at 3051.576 kb on - strand at 3051.695 kb on + strand at 3051.695 kb on + strand at 3051.704 kb on + strand at 3051.704 kb on + strand at 3051.704 kb on + strand at 3051.704 kb on + strand at 3051.821 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand at 3051.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 3,048,278 + -0.2 3,048,278 + -0.7 3,048,278 + -0.4 3,048,278 + -0.2 3,048,278 + -0.8 3,048,278 + +0.1 3,048,278 + -0.0 3,048,279 - +0.1 3,048,279 - -1.1 3,048,279 - -0.3 3,048,279 - -0.7 3,048,279 - -0.3 3,048,389 - -0.6 3,048,446 - -0.0 3,048,646 + +0.5 3,048,646 + -0.1 3,048,647 - +0.1 3,048,824 - +0.1 3,048,824 - +0.2 3,048,948 - -4.7 3,049,038 - -3.4 3,049,069 - -3.2 3,049,163 + -5.3 3,049,164 - -3.5 3,049,374 + SMc04045 0.17 -4.8 3,049,375 - SMc04045 0.17 -4.2 3,049,375 - SMc04045 0.17 -6.5 3,049,375 - SMc04045 0.17 -3.6 3,049,375 - SMc04045 0.17 -4.1 3,049,376 + SMc04045 0.17 -1.6 3,049,376 + SMc04045 0.17 -6.0 3,049,377 - SMc04045 0.17 -4.9 3,049,377 - SMc04045 0.17 -3.6 3,049,795 - SMc04045 0.40 -4.0 3,049,898 + SMc04045 0.46 -2.2 3,049,899 - SMc04045 0.46 -3.8 3,049,926 + SMc04045 0.47 -1.0 3,049,939 + SMc04045 0.48 -1.2 3,050,036 - SMc04045 0.53 -5.6 3,050,550 + SMc04045 0.81 -5.1 3,050,838 + -7.1 3,050,838 + -5.6 3,050,839 - -4.8 3,051,126 + SMc04046 0.14 -3.3 3,051,126 + SMc04046 0.14 +0.7 3,051,126 + SMc04046 0.14 -0.3 3,051,126 + SMc04046 0.14 -0.9 3,051,127 - SMc04046 0.14 -0.2 3,051,128 + SMc04046 0.14 -0.1 3,051,128 + SMc04046 0.14 -0.5 3,051,128 + SMc04046 0.14 -0.0 3,051,129 - SMc04046 0.15 -0.2 3,051,129 - SMc04046 0.15 -0.2 3,051,129 - SMc04046 0.15 +0.7 3,051,221 + SMc04046 0.37 +1.0 3,051,234 - SMc04046 0.40 +0.1 3,051,360 - SMc04046 0.72 -2.3 3,051,453 + +0.6 3,051,453 + +0.5 3,051,453 + -0.1 3,051,454 - +0.1 3,051,454 - -0.0 3,051,460 - +0.4 3,051,460 - -0.4 3,051,460 - +0.3 3,051,498 + +0.1 3,051,531 + -0.2 3,051,531 + -0.9 3,051,531 + +0.8 3,051,531 + -0.1 3,051,545 + -0.1 3,051,546 - -0.3 3,051,546 - +2.1 3,051,568 + -0.4 3,051,572 - -0.7 3,051,575 + -1.6 3,051,576 - -0.8 3,051,576 - -0.8 3,051,576 - -0.3 3,051,576 - +0.0 3,051,576 - +0.8 3,051,695 + +1.5 3,051,695 + +0.1 3,051,704 + -0.6 3,051,704 + +0.4 3,051,704 + +0.3 3,051,704 + +0.4 3,051,821 - -0.2 3,051,823 - +0.0 3,051,823 - +0.3 3,051,823 - +0.1 3,051,823 - +0.2 3,051,823 - +0.5 3,051,823 - -1.0 3,051,823 - -0.1 3,051,823 - -1.6 3,051,823 - -0.1 3,051,823 - -0.1
Or see this region's nucleotide sequence