Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00761 and SMc00762 are separated by 16 nucleotides SMc00762 and SMc00763 are separated by 124 nucleotides
SMc00761: SMc00761 - oxidoreductase, at 770,925 to 772,211
SMc00761
SMc00762: SMc00762 - glutamine synthetase, at 772,228 to 773,664
SMc00762
SMc00763: SMc00763 - hypothetical protein, at 773,789 to 774,973
SMc00763
Position (kb) 772
773
774 Strain fitness (log2 ratio) -1
0
1 at 771.229 kb on + strand, within SMc00761 at 771.252 kb on + strand, within SMc00761 at 771.290 kb on - strand, within SMc00761 at 771.290 kb on - strand, within SMc00761 at 771.340 kb on + strand, within SMc00761 at 771.341 kb on - strand, within SMc00761 at 771.341 kb on - strand, within SMc00761 at 771.479 kb on + strand, within SMc00761 at 771.481 kb on + strand, within SMc00761 at 771.481 kb on + strand, within SMc00761 at 771.482 kb on - strand, within SMc00761 at 771.482 kb on - strand, within SMc00761 at 771.482 kb on - strand, within SMc00761 at 771.482 kb on - strand, within SMc00761 at 771.788 kb on - strand, within SMc00761 at 771.880 kb on + strand, within SMc00761 at 771.880 kb on + strand, within SMc00761 at 771.880 kb on + strand, within SMc00761 at 771.880 kb on + strand, within SMc00761 at 771.881 kb on - strand, within SMc00761 at 772.313 kb on + strand at 772.313 kb on + strand at 772.506 kb on - strand, within SMc00762 at 772.661 kb on + strand, within SMc00762 at 772.662 kb on - strand, within SMc00762 at 772.694 kb on + strand, within SMc00762 at 772.694 kb on + strand, within SMc00762 at 772.711 kb on + strand, within SMc00762 at 772.712 kb on - strand, within SMc00762 at 772.800 kb on + strand, within SMc00762 at 772.800 kb on + strand, within SMc00762 at 772.801 kb on - strand, within SMc00762 at 772.801 kb on - strand, within SMc00762 at 772.801 kb on - strand, within SMc00762 at 772.853 kb on + strand, within SMc00762 at 772.853 kb on + strand, within SMc00762 at 773.018 kb on + strand, within SMc00762 at 773.018 kb on + strand, within SMc00762 at 773.019 kb on - strand, within SMc00762 at 773.156 kb on - strand, within SMc00762 at 773.241 kb on - strand, within SMc00762 at 773.421 kb on - strand, within SMc00762 at 773.421 kb on - strand, within SMc00762 at 773.448 kb on + strand, within SMc00762 at 773.664 kb on + strand at 773.664 kb on + strand at 773.665 kb on - strand at 773.665 kb on - strand at 773.665 kb on - strand at 773.665 kb on - strand at 773.699 kb on + strand at 773.700 kb on - strand at 773.717 kb on + strand at 773.717 kb on + strand at 773.718 kb on - strand at 773.721 kb on + strand at 773.721 kb on + strand at 773.721 kb on + strand at 773.722 kb on - strand at 773.722 kb on - strand at 773.722 kb on - strand at 773.953 kb on + strand, within SMc00763 at 773.953 kb on + strand, within SMc00763 at 773.953 kb on + strand, within SMc00763 at 774.311 kb on + strand, within SMc00763 at 774.506 kb on - strand, within SMc00763 at 774.506 kb on - strand, within SMc00763 at 774.525 kb on - strand, within SMc00763 at 774.525 kb on - strand, within SMc00763 at 774.525 kb on - strand, within SMc00763
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 771,229 + SMc00761 0.24 -0.5 771,252 + SMc00761 0.25 +0.4 771,290 - SMc00761 0.28 -1.4 771,290 - SMc00761 0.28 -0.3 771,340 + SMc00761 0.32 -0.4 771,341 - SMc00761 0.32 -0.7 771,341 - SMc00761 0.32 -0.5 771,479 + SMc00761 0.43 -0.9 771,481 + SMc00761 0.43 -0.2 771,481 + SMc00761 0.43 -0.4 771,482 - SMc00761 0.43 -0.5 771,482 - SMc00761 0.43 -1.6 771,482 - SMc00761 0.43 -0.5 771,482 - SMc00761 0.43 +0.0 771,788 - SMc00761 0.67 -0.7 771,880 + SMc00761 0.74 -0.2 771,880 + SMc00761 0.74 -0.4 771,880 + SMc00761 0.74 +0.0 771,880 + SMc00761 0.74 -0.2 771,881 - SMc00761 0.74 -0.5 772,313 + +0.1 772,313 + +0.8 772,506 - SMc00762 0.19 +0.8 772,661 + SMc00762 0.30 +0.3 772,662 - SMc00762 0.30 +0.2 772,694 + SMc00762 0.32 +0.5 772,694 + SMc00762 0.32 -0.0 772,711 + SMc00762 0.34 -0.6 772,712 - SMc00762 0.34 -0.2 772,800 + SMc00762 0.40 -0.4 772,800 + SMc00762 0.40 -0.0 772,801 - SMc00762 0.40 +0.3 772,801 - SMc00762 0.40 -0.6 772,801 - SMc00762 0.40 -0.1 772,853 + SMc00762 0.43 +0.1 772,853 + SMc00762 0.43 -0.7 773,018 + SMc00762 0.55 -0.3 773,018 + SMc00762 0.55 -0.2 773,019 - SMc00762 0.55 +0.8 773,156 - SMc00762 0.65 -0.4 773,241 - SMc00762 0.70 +0.6 773,421 - SMc00762 0.83 -0.1 773,421 - SMc00762 0.83 -0.5 773,448 + SMc00762 0.85 -0.2 773,664 + +0.1 773,664 + -0.2 773,665 - -0.6 773,665 - -0.1 773,665 - -0.1 773,665 - +0.9 773,699 + -0.4 773,700 - +0.2 773,717 + -0.2 773,717 + -0.3 773,718 - +0.2 773,721 + -0.1 773,721 + -1.0 773,721 + -0.2 773,722 - +0.3 773,722 - -0.5 773,722 - +0.1 773,953 + SMc00763 0.14 +0.3 773,953 + SMc00763 0.14 +1.5 773,953 + SMc00763 0.14 +0.4 774,311 + SMc00763 0.44 -0.1 774,506 - SMc00763 0.61 +0.1 774,506 - SMc00763 0.61 -0.4 774,525 - SMc00763 0.62 +0.5 774,525 - SMc00763 0.62 +0.4 774,525 - SMc00763 0.62 +0.4
Or see this region's nucleotide sequence