Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21601 and SM_b21602 are separated by 126 nucleotides SM_b21602 and SM_b21603 are separated by 3 nucleotides SM_b21603 and SM_b21604 are separated by 78 nucleotides
SM_b21601: SM_b21601 - ArsR family transcriptional regulator, at 1,142,033 to 1,142,953
_b21601
SM_b21602: SM_b21602 - sugar uptake ABC transporter permease, at 1,143,080 to 1,143,904
_b21602
SM_b21603: SM_b21603 - sugar uptake ABC transporter permease, at 1,143,908 to 1,144,783
_b21603
SM_b21604: SM_b21604 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,144,862 to 1,146,124
_b21604
Position (kb)
1143
1144 Strain fitness (log2 ratio)
-2
-1
0
1 at 1142.133 kb on - strand, within SM_b21601 at 1142.215 kb on + strand, within SM_b21601 at 1142.253 kb on + strand, within SM_b21601 at 1142.254 kb on - strand, within SM_b21601 at 1142.289 kb on + strand, within SM_b21601 at 1142.290 kb on - strand, within SM_b21601 at 1142.290 kb on - strand, within SM_b21601 at 1142.332 kb on - strand, within SM_b21601 at 1142.455 kb on + strand, within SM_b21601 at 1142.455 kb on + strand, within SM_b21601 at 1142.456 kb on - strand, within SM_b21601 at 1142.456 kb on - strand, within SM_b21601 at 1142.475 kb on + strand, within SM_b21601 at 1142.476 kb on - strand, within SM_b21601 at 1142.476 kb on - strand, within SM_b21601 at 1142.476 kb on - strand, within SM_b21601 at 1142.697 kb on + strand, within SM_b21601 at 1142.697 kb on + strand, within SM_b21601 at 1142.743 kb on + strand, within SM_b21601 at 1142.744 kb on - strand, within SM_b21601 at 1142.936 kb on - strand at 1142.953 kb on + strand at 1142.954 kb on - strand at 1143.142 kb on - strand at 1143.195 kb on + strand, within SM_b21602 at 1143.306 kb on + strand, within SM_b21602 at 1143.306 kb on + strand, within SM_b21602 at 1143.307 kb on - strand, within SM_b21602 at 1143.307 kb on - strand, within SM_b21602 at 1143.307 kb on - strand, within SM_b21602 at 1143.307 kb on - strand, within SM_b21602 at 1143.307 kb on - strand, within SM_b21602 at 1143.354 kb on + strand, within SM_b21602 at 1143.520 kb on - strand, within SM_b21602 at 1143.520 kb on - strand, within SM_b21602 at 1143.630 kb on + strand, within SM_b21602 at 1143.631 kb on - strand, within SM_b21602 at 1143.699 kb on + strand, within SM_b21602 at 1143.699 kb on + strand, within SM_b21602 at 1143.735 kb on + strand, within SM_b21602 at 1143.785 kb on - strand, within SM_b21602 at 1143.825 kb on + strand at 1143.825 kb on + strand at 1143.825 kb on + strand at 1143.825 kb on + strand at 1143.826 kb on - strand at 1143.862 kb on + strand at 1143.863 kb on - strand at 1143.880 kb on + strand at 1143.880 kb on + strand at 1143.936 kb on + strand at 1143.937 kb on - strand at 1143.937 kb on - strand at 1144.029 kb on + strand, within SM_b21603 at 1144.030 kb on - strand, within SM_b21603 at 1144.050 kb on + strand, within SM_b21603 at 1144.050 kb on + strand, within SM_b21603 at 1144.051 kb on - strand, within SM_b21603 at 1144.051 kb on - strand, within SM_b21603 at 1144.051 kb on - strand, within SM_b21603 at 1144.051 kb on - strand, within SM_b21603 at 1144.087 kb on - strand, within SM_b21603 at 1144.221 kb on + strand, within SM_b21603 at 1144.222 kb on - strand, within SM_b21603 at 1144.222 kb on - strand, within SM_b21603 at 1144.323 kb on - strand, within SM_b21603 at 1144.403 kb on + strand, within SM_b21603 at 1144.446 kb on + strand, within SM_b21603 at 1144.446 kb on + strand, within SM_b21603 at 1144.446 kb on + strand, within SM_b21603 at 1144.447 kb on - strand, within SM_b21603 at 1144.447 kb on - strand, within SM_b21603 at 1144.541 kb on + strand, within SM_b21603 at 1144.542 kb on - strand, within SM_b21603 at 1144.617 kb on + strand, within SM_b21603 at 1144.666 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.688 kb on - strand, within SM_b21603 at 1144.688 kb on - strand, within SM_b21603 at 1144.690 kb on - strand, within SM_b21603 at 1144.716 kb on + strand at 1144.792 kb on + strand at 1144.793 kb on - strand at 1144.857 kb on - strand at 1144.864 kb on - strand at 1144.864 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,142,133 - SM_b21601 0.11 +0.5 1,142,215 + SM_b21601 0.20 +0.1 1,142,253 + SM_b21601 0.24 -0.2 1,142,254 - SM_b21601 0.24 -0.6 1,142,289 + SM_b21601 0.28 +0.4 1,142,290 - SM_b21601 0.28 +0.2 1,142,290 - SM_b21601 0.28 +0.3 1,142,332 - SM_b21601 0.32 +0.2 1,142,455 + SM_b21601 0.46 -0.2 1,142,455 + SM_b21601 0.46 -0.0 1,142,456 - SM_b21601 0.46 +0.8 1,142,456 - SM_b21601 0.46 +0.4 1,142,475 + SM_b21601 0.48 +0.5 1,142,476 - SM_b21601 0.48 +0.5 1,142,476 - SM_b21601 0.48 +0.1 1,142,476 - SM_b21601 0.48 +0.2 1,142,697 + SM_b21601 0.72 +0.5 1,142,697 + SM_b21601 0.72 +0.0 1,142,743 + SM_b21601 0.77 -1.8 1,142,744 - SM_b21601 0.77 -0.7 1,142,936 - +0.2 1,142,953 + -0.5 1,142,954 - +0.4 1,143,142 - -0.4 1,143,195 + SM_b21602 0.14 +0.4 1,143,306 + SM_b21602 0.27 -0.2 1,143,306 + SM_b21602 0.27 +0.6 1,143,307 - SM_b21602 0.28 +0.1 1,143,307 - SM_b21602 0.28 +0.6 1,143,307 - SM_b21602 0.28 -0.0 1,143,307 - SM_b21602 0.28 +0.3 1,143,307 - SM_b21602 0.28 -0.7 1,143,354 + SM_b21602 0.33 -0.0 1,143,520 - SM_b21602 0.53 -0.5 1,143,520 - SM_b21602 0.53 +0.8 1,143,630 + SM_b21602 0.67 -1.0 1,143,631 - SM_b21602 0.67 +1.2 1,143,699 + SM_b21602 0.75 +0.2 1,143,699 + SM_b21602 0.75 -0.0 1,143,735 + SM_b21602 0.79 +0.0 1,143,785 - SM_b21602 0.85 -0.0 1,143,825 + +0.1 1,143,825 + -0.4 1,143,825 + -0.5 1,143,825 + +0.9 1,143,826 - +0.1 1,143,862 + +0.0 1,143,863 - +0.1 1,143,880 + -0.2 1,143,880 + -0.1 1,143,936 + -0.1 1,143,937 - -0.2 1,143,937 - +0.7 1,144,029 + SM_b21603 0.14 -0.3 1,144,030 - SM_b21603 0.14 -0.4 1,144,050 + SM_b21603 0.16 -0.1 1,144,050 + SM_b21603 0.16 -0.1 1,144,051 - SM_b21603 0.16 +0.1 1,144,051 - SM_b21603 0.16 -1.0 1,144,051 - SM_b21603 0.16 -0.4 1,144,051 - SM_b21603 0.16 -1.0 1,144,087 - SM_b21603 0.20 +0.9 1,144,221 + SM_b21603 0.36 -0.4 1,144,222 - SM_b21603 0.36 -0.7 1,144,222 - SM_b21603 0.36 +0.4 1,144,323 - SM_b21603 0.47 +0.7 1,144,403 + SM_b21603 0.57 -0.1 1,144,446 + SM_b21603 0.61 -0.3 1,144,446 + SM_b21603 0.61 -0.3 1,144,446 + SM_b21603 0.61 +0.2 1,144,447 - SM_b21603 0.62 -0.1 1,144,447 - SM_b21603 0.62 +0.1 1,144,541 + SM_b21603 0.72 -0.6 1,144,542 - SM_b21603 0.72 +0.3 1,144,617 + SM_b21603 0.81 -0.5 1,144,666 + SM_b21603 0.87 -0.0 1,144,687 + SM_b21603 0.89 +0.3 1,144,687 + SM_b21603 0.89 +0.2 1,144,687 + SM_b21603 0.89 +0.1 1,144,687 + SM_b21603 0.89 +0.6 1,144,687 + SM_b21603 0.89 -0.8 1,144,688 - SM_b21603 0.89 -0.5 1,144,688 - SM_b21603 0.89 +0.1 1,144,690 - SM_b21603 0.89 -0.2 1,144,716 + -0.1 1,144,792 + +0.4 1,144,793 - -0.1 1,144,857 - +0.1 1,144,864 - -0.2 1,144,864 - -0.5
Or see this region's nucleotide sequence