Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3301

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
3,686,449	+		Pf1N1B4_3300	0.47	-0.6
3,686,449	+		Pf1N1B4_3300	0.47	+0.5
3,686,476	+		Pf1N1B4_3300	0.48	-0.2
3,686,477	-		Pf1N1B4_3300	0.49	+0.2
3,686,477	-		Pf1N1B4_3300	0.49	-0.1
3,686,689	+		Pf1N1B4_3300	0.60	-0.9
3,686,689	+		Pf1N1B4_3300	0.60	+0.2
3,686,690	-		Pf1N1B4_3300	0.60	+0.0
3,686,690	-		Pf1N1B4_3300	0.60	-0.9
3,686,846	+		Pf1N1B4_3300	0.69	+0.2
3,687,109	+		Pf1N1B4_3300	0.84	-0.6
3,687,109	+		Pf1N1B4_3300	0.84	-1.6
3,687,278	-				+1.8
3,687,352	+				+0.5
3,688,042	+		Pf1N1B4_3301	0.17	+0.4
3,688,042	+		Pf1N1B4_3301	0.17	+0.4
3,688,042	+		Pf1N1B4_3301	0.17	+0.2
3,688,043	-		Pf1N1B4_3301	0.17	-0.5
3,688,043	-		Pf1N1B4_3301	0.17	+2.0
3,688,043	-		Pf1N1B4_3301	0.17	+0.6
3,688,043	-		Pf1N1B4_3301	0.17	-0.6
3,688,096	+		Pf1N1B4_3301	0.19	-0.7
3,688,096	+		Pf1N1B4_3301	0.19	+0.4
3,688,096	+		Pf1N1B4_3301	0.19	+0.5
3,688,096	+		Pf1N1B4_3301	0.19	+0.6
3,688,096	+		Pf1N1B4_3301	0.19	+0.6
3,688,097	-		Pf1N1B4_3301	0.19	-0.8
3,688,097	-				+0.6
3,688,097	-		Pf1N1B4_3301	0.19	+0.6
3,688,097	-		Pf1N1B4_3301	0.19	+0.9
3,688,097	-		Pf1N1B4_3301	0.19	+0.6
3,688,097	-				+1.2
3,688,156	+		Pf1N1B4_3301	0.21	+0.4
3,688,156	+		Pf1N1B4_3301	0.21	-0.8
3,688,157	-		Pf1N1B4_3301	0.21	-0.1
3,688,183	+		Pf1N1B4_3301	0.21	-1.0
3,688,183	+		Pf1N1B4_3301	0.21	+0.2
3,688,184	-		Pf1N1B4_3301	0.21	-0.6
3,688,287	+		Pf1N1B4_3301	0.24	+1.0
3,688,300	+		Pf1N1B4_3301	0.24	-0.2
3,688,300	+		Pf1N1B4_3301	0.24	+2.0
3,688,300	+		Pf1N1B4_3301	0.24	+0.9
3,688,300	+		Pf1N1B4_3301	0.24	+0.1
3,688,300	+		Pf1N1B4_3301	0.24	+1.0
3,688,300	+		Pf1N1B4_3301	0.24	+1.6
3,688,300	+		Pf1N1B4_3301	0.24	-0.6
3,688,301	-		Pf1N1B4_3301	0.25	-0.9
3,689,101	+		Pf1N1B4_3301	0.46	+0.0
3,689,101	+		Pf1N1B4_3301	0.46	-0.9
3,689,101	+		Pf1N1B4_3301	0.46	+0.2
3,689,101	+		Pf1N1B4_3301	0.46	-0.4
3,689,102	-		Pf1N1B4_3301	0.47	-0.4
3,689,117	-		Pf1N1B4_3301	0.47	-0.4
3,689,117	-		Pf1N1B4_3301	0.47	+1.9
3,689,140	+		Pf1N1B4_3301	0.48	+0.5
3,689,140	+		Pf1N1B4_3301	0.48	-1.1
3,689,141	-		Pf1N1B4_3301	0.48	-0.8
3,689,141	-		Pf1N1B4_3301	0.48	+0.3
3,689,231	+		Pf1N1B4_3301	0.50	+0.1
3,689,232	-		Pf1N1B4_3301	0.50	-0.2
3,689,238	+				+2.2
3,689,238	+		Pf1N1B4_3301	0.50	+1.2
3,689,238	+		Pf1N1B4_3301	0.50	+0.9
3,689,238	+		Pf1N1B4_3301	0.50	-1.4
3,689,238	+		Pf1N1B4_3301	0.50	+0.5
3,689,238	+		Pf1N1B4_3301	0.50	+0.0
3,689,239	-		Pf1N1B4_3301	0.50	+0.2
3,689,239	-		Pf1N1B4_3301	0.50	+0.2
3,689,239	-		Pf1N1B4_3301	0.50	-2.6
3,689,239	-		Pf1N1B4_3301	0.50	-0.5
3,689,239	-		Pf1N1B4_3301	0.50	-0.5
3,689,297	+		Pf1N1B4_3301	0.52	+0.2
3,689,298	-		Pf1N1B4_3301	0.52	-1.6
3,689,298	-		Pf1N1B4_3301	0.52	-1.1
3,689,298	-		Pf1N1B4_3301	0.52	+0.2
3,689,315	-				+0.4
3,689,350	+		Pf1N1B4_3301	0.53	+0.5
3,689,351	-		Pf1N1B4_3301	0.53	+1.2
3,689,351	-		Pf1N1B4_3301	0.53	+0.4
3,689,351	-		Pf1N1B4_3301	0.53	+0.5
3,689,645	-		Pf1N1B4_3301	0.61	-0.5
3,689,702	-		Pf1N1B4_3301	0.63	+0.0
3,689,702	-		Pf1N1B4_3301	0.63	-0.8
3,689,801	-		Pf1N1B4_3301	0.66	-0.6
3,689,897	-		Pf1N1B4_3301	0.68	+0.1
3,690,025	+		Pf1N1B4_3301	0.72	+0.6
3,690,025	+		Pf1N1B4_3301	0.72	+2.0
3,690,025	+		Pf1N1B4_3301	0.72	-1.6
3,690,025	+		Pf1N1B4_3301	0.72	+0.6
3,690,197	-		Pf1N1B4_3301	0.77	+1.8
3,690,197	-				+1.2
3,690,197	-		Pf1N1B4_3301	0.77	-1.2
3,690,197	-		Pf1N1B4_3301	0.77	-0.4
3,690,197	-		Pf1N1B4_3301	0.77	+0.2
3,690,448	+		Pf1N1B4_3301	0.83	-0.6
3,690,448	+		Pf1N1B4_3301	0.83	+1.2
3,690,448	+		Pf1N1B4_3301	0.83	+1.2
3,690,448	+		Pf1N1B4_3301	0.83	+1.2
3,690,448	+		Pf1N1B4_3301	0.83	-0.9
3,690,449	-		Pf1N1B4_3301	0.83	-0.2
3,690,449	-		Pf1N1B4_3301	0.83	+0.8
3,690,449	-		Pf1N1B4_3301	0.83	+0.9
3,690,449	-		Pf1N1B4_3301	0.83	-0.1
3,690,650	+				+1.8
3,690,871	+				+1.2
3,690,871	+				-0.4
3,690,872	-				-1.0
3,690,872	-				-1.1
3,690,872	-				-0.4
3,690,993	-				+1.6
3,691,284	-				+0.4
3,691,284	-				+0.8
3,691,284	-				-1.4
3,691,392	+				+0.2
3,691,392	+				+0.9
3,691,393	-				-0.7
3,691,470	+				-0.1
3,691,470	+		Pf1N1B4_3302	0.18	+0.6
3,691,471	-		Pf1N1B4_3302	0.18	+0.5
3,691,471	-		Pf1N1B4_3302	0.18	-0.8
3,691,471	-		Pf1N1B4_3302	0.18	-1.3
3,691,605	+		Pf1N1B4_3302	0.39	+0.6
3,691,605	+		Pf1N1B4_3302	0.39	+0.6
3,691,606	-		Pf1N1B4_3302	0.39	-2.5
3,691,606	-		Pf1N1B4_3302	0.39	+1.2
3,691,606	-		Pf1N1B4_3302	0.39	+0.2
3,691,606	-		Pf1N1B4_3302	0.39	-0.6
3,691,606	-				+1.2
3,691,606	-		Pf1N1B4_3302	0.39	-0.9
3,691,606	-		Pf1N1B4_3302	0.39	+0.6
3,691,629	+		Pf1N1B4_3302	0.43	+0.1
3,691,749	+		Pf1N1B4_3302	0.61	+1.0
3,691,750	-		Pf1N1B4_3302	0.62	-0.1
3,691,773	+		Pf1N1B4_3302	0.65	+0.7
3,691,805	+		Pf1N1B4_3302	0.70	-0.2
3,691,805	+		Pf1N1B4_3302	0.70	-0.2
3,691,805	+				-0.6
3,691,805	+		Pf1N1B4_3302	0.70	-0.0
3,691,805	+		Pf1N1B4_3302	0.70	+2.8
3,691,806	-		Pf1N1B4_3302	0.70	-0.1
3,691,806	-		Pf1N1B4_3302	0.70	-2.6
3,691,806	-		Pf1N1B4_3302	0.70	-1.2
3,691,806	-		Pf1N1B4_3302	0.70	+0.4
3,691,813	-		Pf1N1B4_3302	0.71	+0.3
3,691,840	-		Pf1N1B4_3302	0.76	-1.7