Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29620 and AO356_29625 overlap by 1 nucleotides AO356_29625 and AO356_29630 are separated by 12 nucleotides AO356_29630 and AO356_29635 are separated by 146 nucleotides
AO356_29620: AO356_29620 - fusaric acid resistance protein, at 6,891,920 to 6,893,884
_29620
AO356_29625: AO356_29625 - hypothetical protein, at 6,893,884 to 6,894,792
_29625
AO356_29630: AO356_29630 - hypothetical protein, at 6,894,805 to 6,894,993
_29630
AO356_29635: AO356_29635 - transcriptional regulator, at 6,895,140 to 6,895,937
_29635
Position (kb)
6894
6895 Strain fitness (log2 ratio)
-1
0
1
2 at 6893.818 kb on - strand at 6894.215 kb on + strand, within AO356_29625 at 6894.234 kb on + strand, within AO356_29625 at 6894.234 kb on + strand, within AO356_29625 at 6894.235 kb on - strand, within AO356_29625 at 6894.253 kb on + strand, within AO356_29625 at 6894.254 kb on - strand, within AO356_29625 at 6894.312 kb on - strand, within AO356_29625 at 6894.368 kb on - strand, within AO356_29625 at 6894.704 kb on + strand at 6894.705 kb on - strand at 6894.917 kb on + strand, within AO356_29630 at 6894.918 kb on - strand, within AO356_29630 at 6894.941 kb on + strand, within AO356_29630 at 6894.942 kb on - strand, within AO356_29630 at 6894.962 kb on + strand, within AO356_29630 at 6894.963 kb on - strand, within AO356_29630 at 6894.963 kb on - strand, within AO356_29630 at 6894.963 kb on - strand, within AO356_29630 at 6894.963 kb on - strand, within AO356_29630 at 6894.963 kb on - strand, within AO356_29630 at 6895.062 kb on + strand at 6895.063 kb on - strand at 6895.063 kb on - strand at 6895.092 kb on + strand at 6895.412 kb on - strand, within AO356_29635 at 6895.454 kb on + strand, within AO356_29635 at 6895.454 kb on + strand, within AO356_29635 at 6895.596 kb on + strand, within AO356_29635 at 6895.596 kb on + strand, within AO356_29635 at 6895.597 kb on - strand, within AO356_29635 at 6895.597 kb on - strand, within AO356_29635 at 6895.749 kb on - strand, within AO356_29635 at 6895.749 kb on - strand, within AO356_29635 at 6895.749 kb on - strand, within AO356_29635 at 6895.909 kb on - strand at 6895.909 kb on - strand at 6895.963 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 6,893,818 - +0.0 6,894,215 + AO356_29625 0.36 -0.4 6,894,234 + AO356_29625 0.39 -0.1 6,894,234 + AO356_29625 0.39 +1.2 6,894,235 - AO356_29625 0.39 +0.5 6,894,253 + AO356_29625 0.41 +0.5 6,894,254 - AO356_29625 0.41 +0.2 6,894,312 - AO356_29625 0.47 +0.1 6,894,368 - AO356_29625 0.53 +0.7 6,894,704 + -0.6 6,894,705 - +1.4 6,894,917 + AO356_29630 0.59 +1.7 6,894,918 - AO356_29630 0.60 +1.4 6,894,941 + AO356_29630 0.72 +0.2 6,894,942 - AO356_29630 0.72 +1.3 6,894,962 + AO356_29630 0.83 -0.8 6,894,963 - AO356_29630 0.84 +0.4 6,894,963 - AO356_29630 0.84 -0.1 6,894,963 - AO356_29630 0.84 +0.5 6,894,963 - AO356_29630 0.84 +2.1 6,894,963 - AO356_29630 0.84 +1.1 6,895,062 + +0.6 6,895,063 - -0.2 6,895,063 - -0.3 6,895,092 + +1.0 6,895,412 - AO356_29635 0.34 -0.2 6,895,454 + AO356_29635 0.39 +0.7 6,895,454 + AO356_29635 0.39 -0.7 6,895,596 + AO356_29635 0.57 -0.3 6,895,596 + AO356_29635 0.57 +0.1 6,895,597 - AO356_29635 0.57 -0.2 6,895,597 - AO356_29635 0.57 +0.9 6,895,749 - AO356_29635 0.76 -0.8 6,895,749 - AO356_29635 0.76 +0.7 6,895,749 - AO356_29635 0.76 -0.1 6,895,909 - +1.1 6,895,909 - +0.3 6,895,963 - +0.4
Or see this region's nucleotide sequence