Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10590 and AO356_10595 are separated by 684 nucleotides AO356_10595 and AO356_10600 overlap by 4 nucleotides AO356_10600 and AO356_10605 are separated by 10 nucleotides
AO356_10590: AO356_10590 - GntR family transcriptional regulator, at 2,409,427 to 2,410,119
_10590
AO356_10595: AO356_10595 - mangotoxin biosynthesis-involved protein MgoB, at 2,410,804 to 2,411,580
_10595
AO356_10600: AO356_10600 - aminobenzoate oxygenase, at 2,411,577 to 2,412,509
_10600
AO356_10605: AO356_10605 - peptide transporter, at 2,412,520 to 2,416,086
_10605
Position (kb)
2410
2411
2412 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2410.093 kb on + strand at 2410.156 kb on + strand at 2410.156 kb on + strand at 2410.156 kb on + strand at 2410.156 kb on + strand at 2410.157 kb on - strand at 2410.157 kb on - strand at 2410.160 kb on + strand at 2410.160 kb on + strand at 2410.161 kb on - strand at 2410.161 kb on - strand at 2410.161 kb on - strand at 2410.161 kb on - strand at 2410.333 kb on - strand at 2410.393 kb on - strand at 2410.397 kb on + strand at 2410.397 kb on + strand at 2410.397 kb on + strand at 2410.398 kb on - strand at 2410.398 kb on - strand at 2410.408 kb on + strand at 2410.455 kb on - strand at 2410.468 kb on - strand at 2410.644 kb on + strand at 2410.687 kb on + strand at 2410.697 kb on + strand at 2410.754 kb on + strand at 2410.903 kb on - strand, within AO356_10595 at 2411.095 kb on + strand, within AO356_10595 at 2411.095 kb on + strand, within AO356_10595 at 2411.095 kb on + strand, within AO356_10595 at 2411.095 kb on + strand, within AO356_10595 at 2411.096 kb on - strand, within AO356_10595 at 2411.096 kb on - strand, within AO356_10595 at 2411.378 kb on - strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.381 kb on - strand, within AO356_10595 at 2411.381 kb on - strand, within AO356_10595 at 2411.381 kb on - strand, within AO356_10595 at 2411.593 kb on - strand at 2411.593 kb on - strand at 2411.637 kb on - strand at 2411.769 kb on + strand, within AO356_10600 at 2411.769 kb on + strand, within AO356_10600 at 2411.910 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.209 kb on - strand, within AO356_10600 at 2412.216 kb on + strand, within AO356_10600 at 2412.216 kb on + strand, within AO356_10600 at 2412.285 kb on + strand, within AO356_10600 at 2412.286 kb on - strand, within AO356_10600 at 2412.394 kb on - strand, within AO356_10600 at 2412.476 kb on - strand at 2412.495 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,410,093 + +0.9 2,410,156 + -0.0 2,410,156 + +0.6 2,410,156 + -1.6 2,410,156 + -0.7 2,410,157 - -0.1 2,410,157 - -0.0 2,410,160 + +0.8 2,410,160 + -0.4 2,410,161 - +0.6 2,410,161 - -0.6 2,410,161 - -0.5 2,410,161 - +0.2 2,410,333 - +0.5 2,410,393 - +0.3 2,410,397 + -0.3 2,410,397 + +0.0 2,410,397 + -1.8 2,410,398 - +0.3 2,410,398 - -1.6 2,410,408 + -0.9 2,410,455 - +0.5 2,410,468 - +0.3 2,410,644 + -1.5 2,410,687 + +0.4 2,410,697 + +0.3 2,410,754 + +0.9 2,410,903 - AO356_10595 0.13 -0.3 2,411,095 + AO356_10595 0.37 +1.3 2,411,095 + AO356_10595 0.37 +0.1 2,411,095 + AO356_10595 0.37 -0.8 2,411,095 + AO356_10595 0.37 +0.2 2,411,096 - AO356_10595 0.38 -0.4 2,411,096 - AO356_10595 0.38 -0.2 2,411,378 - AO356_10595 0.74 -0.5 2,411,380 + AO356_10595 0.74 -0.9 2,411,380 + AO356_10595 0.74 +0.1 2,411,380 + AO356_10595 0.74 -0.1 2,411,380 + AO356_10595 0.74 +1.1 2,411,380 + AO356_10595 0.74 -1.0 2,411,381 - AO356_10595 0.74 -0.9 2,411,381 - AO356_10595 0.74 -0.5 2,411,381 - AO356_10595 0.74 -0.6 2,411,593 - -0.9 2,411,593 - +0.4 2,411,637 - +0.8 2,411,769 + AO356_10600 0.21 +0.5 2,411,769 + AO356_10600 0.21 +2.0 2,411,910 + AO356_10600 0.36 -1.0 2,412,208 + AO356_10600 0.68 -0.1 2,412,208 + AO356_10600 0.68 -0.6 2,412,208 + AO356_10600 0.68 -0.3 2,412,208 + AO356_10600 0.68 +0.8 2,412,209 - AO356_10600 0.68 -0.6 2,412,216 + AO356_10600 0.68 +0.3 2,412,216 + AO356_10600 0.68 +0.4 2,412,285 + AO356_10600 0.76 +0.7 2,412,286 - AO356_10600 0.76 +0.1 2,412,394 - AO356_10600 0.88 +0.2 2,412,476 - +0.6 2,412,495 + +0.5
Or see this region's nucleotide sequence