Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03777 and SMc03778 are separated by 35 nucleotides SMc03778 and SMc03780 are separated by 44 nucleotides SMc03780 and SMc03781 are separated by 152 nucleotides
SMc03777: SMc03777 - gamma-glutamyl phosphate reductase, at 3,443,374 to 3,444,657
SMc03777
SMc03778: SMc03778 - nicotinic acid mononucleotide adenylyltransferase, at 3,444,693 to 3,445,280
SMc03778
SMc03780: SMc03780 - hypothetical protein, at 3,445,325 to 3,445,816
SMc03780
SMc03781: SMc03781 - rRNA large subunit methyltransferase, at 3,445,969 to 3,446,451
SMc03781
Position (kb)
3444
3445
3446 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3443.767 kb on + strand, within SMc03777 at 3443.767 kb on + strand, within SMc03777 at 3444.097 kb on + strand, within SMc03777 at 3444.097 kb on + strand, within SMc03777 at 3444.097 kb on + strand, within SMc03777 at 3444.097 kb on + strand, within SMc03777 at 3444.097 kb on + strand, within SMc03777 at 3444.097 kb on + strand, within SMc03777 at 3444.097 kb on + strand, within SMc03777 at 3444.097 kb on + strand, within SMc03777 at 3444.197 kb on + strand, within SMc03777 at 3444.197 kb on + strand, within SMc03777 at 3444.293 kb on + strand, within SMc03777 at 3444.293 kb on + strand, within SMc03777 at 3444.423 kb on + strand, within SMc03777 at 3445.317 kb on + strand at 3445.336 kb on + strand at 3445.336 kb on + strand at 3445.341 kb on - strand at 3445.510 kb on - strand, within SMc03780 at 3445.510 kb on - strand, within SMc03780 at 3445.532 kb on - strand, within SMc03780 at 3445.760 kb on + strand, within SMc03780 at 3445.761 kb on - strand, within SMc03780 at 3445.898 kb on + strand at 3445.932 kb on + strand at 3445.974 kb on + strand at 3445.974 kb on + strand at 3446.252 kb on + strand, within SMc03781 at 3446.252 kb on + strand, within SMc03781 at 3446.253 kb on - strand, within SMc03781 at 3446.253 kb on - strand, within SMc03781
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 3,443,767 + SMc03777 0.31 -1.8 3,443,767 + SMc03777 0.31 -2.9 3,444,097 + SMc03777 0.56 -3.9 3,444,097 + SMc03777 0.56 -1.7 3,444,097 + SMc03777 0.56 -4.8 3,444,097 + SMc03777 0.56 -3.0 3,444,097 + SMc03777 0.56 -3.9 3,444,097 + SMc03777 0.56 -3.6 3,444,097 + SMc03777 0.56 -4.3 3,444,097 + SMc03777 0.56 -1.6 3,444,197 + SMc03777 0.64 -3.4 3,444,197 + SMc03777 0.64 -2.8 3,444,293 + SMc03777 0.72 -4.2 3,444,293 + SMc03777 0.72 -3.7 3,444,423 + SMc03777 0.82 -3.6 3,445,317 + -0.3 3,445,336 + +0.8 3,445,336 + +1.7 3,445,341 - -0.9 3,445,510 - SMc03780 0.38 -0.9 3,445,510 - SMc03780 0.38 -0.1 3,445,532 - SMc03780 0.42 +0.2 3,445,760 + SMc03780 0.88 -0.3 3,445,761 - SMc03780 0.89 +0.4 3,445,898 + -0.2 3,445,932 + +0.1 3,445,974 + +0.1 3,445,974 + -0.1 3,446,252 + SMc03781 0.59 -0.3 3,446,252 + SMc03781 0.59 -0.3 3,446,253 - SMc03781 0.59 -0.8 3,446,253 - SMc03781 0.59 -0.1
Or see this region's nucleotide sequence