Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02163 and SMc02162 are separated by 315 nucleotides SMc02162 and SMc02161 are separated by 337 nucleotides
SMc02163: SMc02163 - glucose-6-phosphate isomerase, at 530,745 to 532,370
SMc02163
SMc02162: SMc02162 - long-chain-fatty-acid--CoA ligase, at 532,686 to 534,386
SMc02162
SMc02161: SMc02161 - transport transmembrane protein, at 534,724 to 535,959
SMc02161
Position (kb) 532
533
534
535 Strain fitness (log2 ratio) -2
-1
0
1 at 532.433 kb on - strand at 532.436 kb on + strand at 532.437 kb on - strand at 532.437 kb on - strand at 532.539 kb on - strand at 532.756 kb on + strand at 532.771 kb on + strand at 532.771 kb on + strand at 532.772 kb on - strand at 533.200 kb on - strand, within SMc02162 at 533.452 kb on + strand, within SMc02162 at 533.561 kb on + strand, within SMc02162 at 533.562 kb on - strand, within SMc02162 at 533.562 kb on - strand, within SMc02162 at 533.566 kb on + strand, within SMc02162 at 533.567 kb on - strand, within SMc02162 at 533.717 kb on + strand, within SMc02162 at 533.717 kb on + strand, within SMc02162 at 533.717 kb on + strand, within SMc02162 at 533.717 kb on + strand, within SMc02162 at 533.718 kb on - strand, within SMc02162 at 533.718 kb on - strand, within SMc02162 at 533.718 kb on - strand, within SMc02162 at 533.719 kb on + strand, within SMc02162 at 533.720 kb on - strand, within SMc02162 at 533.955 kb on - strand, within SMc02162 at 534.029 kb on + strand, within SMc02162 at 534.029 kb on + strand, within SMc02162 at 534.031 kb on + strand, within SMc02162 at 534.031 kb on + strand, within SMc02162 at 534.032 kb on - strand, within SMc02162 at 534.079 kb on + strand, within SMc02162 at 534.080 kb on - strand, within SMc02162 at 534.185 kb on + strand, within SMc02162 at 534.244 kb on + strand at 534.245 kb on - strand at 534.286 kb on + strand at 534.286 kb on + strand at 534.478 kb on + strand at 534.479 kb on - strand at 534.479 kb on - strand at 534.511 kb on - strand at 534.544 kb on + strand at 534.544 kb on + strand at 534.544 kb on + strand at 534.544 kb on + strand at 534.544 kb on + strand at 534.545 kb on - strand at 534.545 kb on - strand at 534.545 kb on - strand at 534.612 kb on - strand at 534.612 kb on - strand at 534.613 kb on + strand at 534.626 kb on + strand at 534.628 kb on + strand at 534.670 kb on - strand at 534.766 kb on - strand at 534.766 kb on - strand at 534.941 kb on - strand, within SMc02161
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 532,433 - +0.0 532,436 + -0.1 532,437 - -2.3 532,437 - -0.1 532,539 - +0.2 532,756 + -1.2 532,771 + -0.9 532,771 + -0.5 532,772 - +0.4 533,200 - SMc02162 0.30 -0.7 533,452 + SMc02162 0.45 -0.3 533,561 + SMc02162 0.51 -0.6 533,562 - SMc02162 0.51 -0.2 533,562 - SMc02162 0.51 +0.5 533,566 + SMc02162 0.52 +0.5 533,567 - SMc02162 0.52 -0.4 533,717 + SMc02162 0.61 +0.0 533,717 + SMc02162 0.61 +0.3 533,717 + SMc02162 0.61 +0.1 533,717 + SMc02162 0.61 +0.1 533,718 - SMc02162 0.61 +0.9 533,718 - SMc02162 0.61 +0.3 533,718 - SMc02162 0.61 +0.3 533,719 + SMc02162 0.61 +0.1 533,720 - SMc02162 0.61 +0.5 533,955 - SMc02162 0.75 -0.0 534,029 + SMc02162 0.79 +0.2 534,029 + SMc02162 0.79 -0.6 534,031 + SMc02162 0.79 +0.4 534,031 + SMc02162 0.79 -0.2 534,032 - SMc02162 0.79 +0.0 534,079 + SMc02162 0.82 +0.2 534,080 - SMc02162 0.82 -1.0 534,185 + SMc02162 0.88 -0.1 534,244 + +1.7 534,245 - +0.4 534,286 + +0.2 534,286 + +0.9 534,478 + +0.6 534,479 - -0.6 534,479 - -0.2 534,511 - -0.6 534,544 + +0.0 534,544 + +0.0 534,544 + -0.5 534,544 + -1.0 534,544 + -0.2 534,545 - +0.3 534,545 - +0.1 534,545 - -0.1 534,612 - -0.2 534,612 - -0.3 534,613 + +0.2 534,626 + -0.9 534,628 + -0.1 534,670 - -0.0 534,766 - -0.1 534,766 - -0.4 534,941 - SMc02161 0.18 -0.5
Or see this region's nucleotide sequence