Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37455

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,880,928	+		RR42_RS37450	0.15	+0.2
3,880,928	+		RR42_RS37450	0.15	-1.6
3,880,928	+		RR42_RS37450	0.15	-0.5
3,880,928	+		RR42_RS37450	0.15	-0.0
3,880,929	-		RR42_RS37450	0.15	-3.5
3,880,929	-		RR42_RS37450	0.15	+0.9
3,880,953	-		RR42_RS37450	0.18	+0.7
3,881,007	-		RR42_RS37450	0.24	-0.2
3,881,156	+		RR42_RS37450	0.40	-1.1
3,881,156	+		RR42_RS37450	0.40	+0.1
3,881,157	-		RR42_RS37450	0.41	-0.1
3,881,157	-		RR42_RS37450	0.41	+1.6
3,881,160	+		RR42_RS37450	0.41	-2.9
3,881,161	-		RR42_RS37450	0.41	+0.0
3,881,161	-		RR42_RS37450	0.41	-0.6
3,881,286	-		RR42_RS37450	0.55	-0.1
3,881,620	+				-0.9
3,881,620	+				-1.4
3,881,620	+				-0.9
3,881,620	+				+0.9
3,881,620	+				-0.6
3,881,621	-				-0.6
3,881,621	-				-1.4
3,881,621	-				-0.0
3,881,621	-				+0.1
3,881,633	+				+0.8
3,881,633	+				+0.2
3,881,634	-				+1.4
3,881,634	-				-0.7
3,881,796	+				+0.1
3,881,796	+				+2.2
3,881,796	+				+1.2
3,881,797	-				-0.5
3,882,046	-		RR42_RS37455	0.67	-0.9
3,882,210	-				+1.2
3,882,210	-				+0.2
3,882,252	+				+0.8
3,882,252	+				+1.0
3,882,252	+				-1.2
3,882,253	-				-0.5
3,882,253	-				-1.5
3,882,253	-				+0.0
3,882,517	+				+1.2
3,882,517	+				+1.0
3,882,518	-				-1.0
3,882,518	-				-0.8
3,882,589	+				-1.4
3,882,650	+				-2.7
3,882,650	+				-2.6
3,882,650	+				-1.1
3,882,651	-				-2.4
3,882,651	-				-1.1
3,882,651	-				-0.2
3,883,001	+		RR42_RS37460	0.28	+0.4
3,883,002	-		RR42_RS37460	0.28	+0.8