Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36920

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,737,532	+		RR42_RS36915	0.21	+0.2
3,737,533	-		RR42_RS36915	0.21	-1.7
3,737,533	-		RR42_RS36915	0.21	+0.0
3,737,926	+		RR42_RS36915	0.63	-0.8
3,737,926	+		RR42_RS36915	0.63	-2.1
3,737,926	+		RR42_RS36915	0.63	+1.1
3,737,927	-		RR42_RS36915	0.64	+0.1
3,737,927	-		RR42_RS36915	0.64	-0.5
3,737,927	-		RR42_RS36915	0.64	-1.9
3,737,961	+		RR42_RS36915	0.67	+1.0
3,737,961	+		RR42_RS36915	0.67	-0.1
3,737,961	+		RR42_RS36915	0.67	+0.1
3,737,961	+		RR42_RS36915	0.67	+1.0
3,737,962	-		RR42_RS36915	0.67	-1.1
3,737,962	-		RR42_RS36915	0.67	+0.3
3,737,962	-		RR42_RS36915	0.67	+0.2
3,737,962	-		RR42_RS36915	0.67	-3.0
3,737,962	-		RR42_RS36915	0.67	+2.0
3,738,041	-		RR42_RS36915	0.76	+0.7
3,738,063	+		RR42_RS36915	0.78	+0.8
3,738,064	+		RR42_RS36915	0.78	+0.4
3,738,064	-		RR42_RS36915	0.78	+0.2
3,738,776	+		RR42_RS36920	0.40	-2.0
3,738,776	+		RR42_RS36920	0.40	+0.0
3,738,959	+		RR42_RS36920	0.66	-1.5
3,738,959	+		RR42_RS36920	0.66	-1.1
3,739,228	+				-1.5
3,739,229	-				-2.1
3,739,324	+				+0.1
3,739,369	+		RR42_RS36925	0.12	-0.5
3,739,370	-		RR42_RS36925	0.12	-0.2
3,739,563	+		RR42_RS36925	0.26	+1.2
3,739,564	-		RR42_RS36925	0.26	+0.0
3,739,564	-		RR42_RS36925	0.26	+1.6
3,739,564	-		RR42_RS36925	0.26	+2.2
3,740,035	+		RR42_RS36925	0.60	-3.2
3,740,036	-		RR42_RS36925	0.60	-0.8
3,740,039	+		RR42_RS36925	0.60	-0.2
3,740,039	+		RR42_RS36925	0.60	+0.6
3,740,040	-		RR42_RS36925	0.60	+1.0
3,740,040	-		RR42_RS36925	0.60	-1.0
3,740,040	-		RR42_RS36925	0.60	+1.1
3,740,099	-		RR42_RS36925	0.64	+0.1
3,740,099	-		RR42_RS36925	0.64	-1.8
3,740,204	-		RR42_RS36925	0.72	-0.2