Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36490

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,642,310	-		RR42_RS36485	0.75	-1.2
3,642,472	-		RR42_RS36485	0.83	+0.4
3,642,555	+		RR42_RS36485	0.88	-0.0
3,642,688	-				+0.9
3,642,721	-				+0.0
3,642,735	+				-1.1
3,642,735	+				+1.7
3,642,736	-				-0.6
3,642,736	-				+0.9
3,642,771	+				-0.5
3,642,771	+				+0.9
3,642,790	+				+0.4
3,642,791	-				+0.2
3,642,791	-				+0.1
3,642,828	-				-0.3
3,642,828	-				+0.1
3,642,828	-				+1.4
3,642,833	+				-0.5
3,642,834	-				-1.6
3,642,836	+				-1.8
3,642,836	+				-0.3
3,642,837	-				-0.5
3,642,837	-				+0.3
3,642,843	+				-1.5
3,642,844	-				+0.7
3,642,844	-				+0.9
3,642,844	-				-0.2
3,643,010	-				-1.6
3,643,068	+				-0.4
3,643,068	+				-0.9
3,643,068	+				+0.3
3,643,068	+				-1.6
3,643,069	-				+1.7
3,643,163	+				+0.4
3,643,327	+				-0.7
3,643,327	+				-0.3
3,643,328	-				-2.8
3,643,328	-				-0.1
3,643,329	+				-1.6
3,643,526	-		RR42_RS36490	0.26	+0.2
3,643,881	+		RR42_RS36490	0.55	-0.0
3,643,881	+		RR42_RS36490	0.55	-0.4
3,643,920	+		RR42_RS36490	0.59	-0.3
3,643,921	-		RR42_RS36490	0.59	-0.6
3,643,921	-		RR42_RS36490	0.59	-1.1
3,643,921	-		RR42_RS36490	0.59	-1.2
3,644,073	+		RR42_RS36490	0.72	-0.6
3,644,073	+		RR42_RS36490	0.72	-0.4
3,644,085	+		RR42_RS36490	0.73	-2.8
3,644,085	+		RR42_RS36490	0.73	-4.0
3,644,265	+		RR42_RS36490	0.88	-0.7
3,644,324	+				+2.1
3,644,324	+				+0.7
3,644,325	-				+0.1
3,644,485	+				-0.3
3,644,485	+				-0.6
3,644,485	+				+1.5
3,644,486	-				-2.4
3,644,486	-				-2.4
3,644,486	-				-1.3
3,644,848	+		RR42_RS36495	0.44	+0.4
3,644,848	+		RR42_RS36495	0.44	-2.0
3,644,848	+		RR42_RS36495	0.44	-0.6
3,644,849	-		RR42_RS36495	0.44	+0.2
3,644,849	-		RR42_RS36495	0.44	+0.6
3,644,849	-		RR42_RS36495	0.44	+0.4
3,645,265	+				+0.1
3,645,266	-				+0.8
3,645,312	-				-0.1
3,645,329	+				-0.4
3,645,329	+				-0.0
3,645,330	-				-1.1
3,645,330	-				-1.6