Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36445

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,630,723	+				+0.7
3,630,807	+		RR42_RS36440	0.16	+0.4
3,630,807	+		RR42_RS36440	0.16	-0.8
3,630,807	+		RR42_RS36440	0.16	+1.6
3,630,807	+		RR42_RS36440	0.16	+0.5
3,630,809	+		RR42_RS36440	0.16	-0.9
3,630,810	-		RR42_RS36440	0.16	-0.6
3,630,810	-		RR42_RS36440	0.16	+1.8
3,630,810	-		RR42_RS36440	0.16	-0.1
3,630,810	-		RR42_RS36440	0.16	-0.0
3,631,091	+		RR42_RS36440	0.48	-0.1
3,631,092	-		RR42_RS36440	0.48	+0.3
3,631,250	+		RR42_RS36440	0.65	+0.2
3,631,251	-		RR42_RS36440	0.66	+1.0
3,631,251	-		RR42_RS36440	0.66	-0.5
3,631,407	+		RR42_RS36440	0.83	-0.2
3,631,407	+		RR42_RS36440	0.83	+0.4
3,631,408	-		RR42_RS36440	0.83	+1.2
3,631,635	-				-0.2
3,631,635	-				-0.7
3,631,772	-				-1.4
3,631,772	-				-1.0
3,632,123	-		RR42_RS36445	0.34	-0.2
3,632,191	+		RR42_RS36445	0.39	+2.2
3,632,192	-		RR42_RS36445	0.40	+1.8
3,632,192	-		RR42_RS36445	0.40	-0.1
3,632,350	+		RR42_RS36445	0.53	-2.3
3,632,350	+		RR42_RS36445	0.53	-1.5
3,632,422	+		RR42_RS36445	0.59	-2.0
3,632,893	+				+1.5
3,632,894	-				+0.0
3,632,913	+				-0.4
3,632,914	-				-0.1
3,632,914	-				+0.1
3,632,914	-				-1.6
3,632,944	-				-2.4
3,632,948	+				+1.4
3,632,948	+				+0.5
3,632,948	+				-2.5
3,632,949	-				-0.0
3,632,949	-				-0.3
3,633,031	+				+0.2
3,633,031	+				+0.0
3,633,032	-				+0.5
3,633,203	-		RR42_RS36450	0.46	+1.5
3,633,386	-		RR42_RS36450	0.85	+0.9
3,633,421	+				-2.3
3,633,421	+				+2.1
3,633,422	-				-0.4
3,633,827	+		RR42_RS36455	0.30	+0.1
3,633,827	+		RR42_RS36455	0.30	+0.3
3,633,828	-		RR42_RS36455	0.31	-0.5
3,633,828	-		RR42_RS36455	0.31	-0.1
3,633,828	-		RR42_RS36455	0.31	-0.0