Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36150

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,558,253	+		RR42_RS36145	0.60	+0.2
3,558,253	+		RR42_RS36145	0.60	-0.4
3,558,334	+		RR42_RS36145	0.64	+0.4
3,558,334	+		RR42_RS36145	0.64	+0.4
3,558,334	+		RR42_RS36145	0.64	-2.6
3,558,397	+		RR42_RS36145	0.67	+0.5
3,558,412	+		RR42_RS36145	0.68	-0.3
3,558,412	+		RR42_RS36145	0.68	-0.8
3,558,412	+		RR42_RS36145	0.68	+0.8
3,558,413	-		RR42_RS36145	0.68	+0.4
3,558,413	-		RR42_RS36145	0.68	-0.5
3,558,413	-		RR42_RS36145	0.68	+0.9
3,558,413	-		RR42_RS36145	0.68	-0.0
3,558,433	+		RR42_RS36145	0.69	-0.4
3,558,433	+		RR42_RS36145	0.69	-0.1
3,558,434	-		RR42_RS36145	0.69	+0.4
3,558,434	-		RR42_RS36145	0.69	-2.1
3,558,434	-		RR42_RS36145	0.69	-0.9
3,558,434	-		RR42_RS36145	0.69	+0.1
3,558,646	+		RR42_RS36145	0.79	-0.2
3,558,646	+		RR42_RS36145	0.79	+0.8
3,558,646	+		RR42_RS36145	0.79	+0.2
3,558,647	-		RR42_RS36145	0.79	+0.3
3,558,647	-		RR42_RS36145	0.79	-1.8
3,558,647	-		RR42_RS36145	0.79	+0.2
3,558,673	+		RR42_RS36145	0.80	+0.4
3,558,674	-		RR42_RS36145	0.80	-0.2
3,558,962	-				+2.2
3,558,962	-				-0.9
3,559,069	+				-1.0
3,559,069	+				-0.7
3,559,070	-				-1.0
3,559,070	-				+1.2
3,559,070	-				-0.8
3,559,070	-				+1.6
3,559,070	-				-1.3
3,559,093	-				-0.9
3,559,284	+		RR42_RS36150	0.21	+0.3
3,559,337	+		RR42_RS36150	0.32	-2.7
3,559,337	+		RR42_RS36150	0.32	-1.4
3,559,513	-		RR42_RS36150	0.68	-0.8
3,559,572	-		RR42_RS36150	0.80	-0.8
3,559,773	+				-0.7
3,559,773	+				+1.8
3,559,945	+		RR42_RS36155	0.18	+1.1
3,559,945	+		RR42_RS36155	0.18	-0.8
3,559,946	-		RR42_RS36155	0.18	+1.3
3,559,946	-		RR42_RS36155	0.18	-1.3
3,559,949	-		RR42_RS36155	0.18	-0.7
3,559,949	-		RR42_RS36155	0.18	-1.2
3,559,949	-		RR42_RS36155	0.18	+0.9
3,559,949	-		RR42_RS36155	0.18	-0.4
3,560,068	-		RR42_RS36155	0.26	-2.3
3,560,222	-		RR42_RS36155	0.35	-0.6
3,560,330	+		RR42_RS36155	0.42	-0.9
3,560,330	+		RR42_RS36155	0.42	-0.1
3,560,330	+		RR42_RS36155	0.42	-1.2
3,560,536	+		RR42_RS36155	0.55	-0.5
3,560,536	+		RR42_RS36155	0.55	-0.4
3,560,536	+		RR42_RS36155	0.55	-0.8
3,560,536	+		RR42_RS36155	0.55	+0.2
3,560,536	+		RR42_RS36155	0.55	+0.7
3,560,536	+		RR42_RS36155	0.55	-1.5
3,560,536	+		RR42_RS36155	0.55	+1.4
3,560,537	-		RR42_RS36155	0.55	-0.6
3,560,537	-		RR42_RS36155	0.55	+1.2
3,560,537	-		RR42_RS36155	0.55	-0.7
3,560,537	-		RR42_RS36155	0.55	-0.3
3,560,545	+		RR42_RS36155	0.56	+0.2
3,560,546	-		RR42_RS36155	0.56	+0.2
3,560,548	+		RR42_RS36155	0.56	+0.2
3,560,548	+		RR42_RS36155	0.56	-1.1
3,560,548	+		RR42_RS36155	0.56	-0.3