Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36115

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,550,648	+				+1.5
3,550,649	-				+0.2
3,550,693	+				+0.3
3,550,693	+				-0.0
3,550,693	+				+2.6
3,550,694	-				-0.6
3,550,694	-				-1.9
3,550,694	-				-1.5
3,550,694	-				-0.6
3,550,694	-				+0.3
3,550,694	-				+0.3
3,550,694	-				+0.8
3,550,695	+				+0.6
3,550,695	+				+1.4
3,550,696	-				+0.4
3,550,883	+				-1.4
3,550,884	-				-0.5
3,550,975	+		RR42_RS36110	0.22	-1.3
3,550,976	-		RR42_RS36110	0.22	+0.6
3,550,976	-		RR42_RS36110	0.22	-0.5
3,551,128	-		RR42_RS36110	0.49	+1.6
3,551,162	+		RR42_RS36110	0.55	+0.9
3,551,162	+		RR42_RS36110	0.55	+0.6
3,551,575	+				+0.6
3,551,575	+				+0.7
3,551,575	+				-2.5
3,551,575	+				+1.8
3,551,576	-				-0.3
3,551,576	-				-0.7
3,551,576	-				+1.0
3,551,576	-				-2.1
3,551,576	-				+0.9
3,551,576	-				+0.2
3,551,580	+				+0.3
3,551,849	+		RR42_RS36115	0.78	-2.7
3,551,849	+		RR42_RS36115	0.78	-1.3
3,551,849	+		RR42_RS36115	0.78	-1.0
3,551,849	+		RR42_RS36115	0.78	+0.5
3,551,849	+		RR42_RS36115	0.78	+0.1
3,551,946	+				-1.6
3,551,946	+				-0.3
3,551,946	+				-0.7
3,551,946	+				+0.7
3,551,946	+				+0.9
3,551,947	-				-2.3
3,551,947	-				-2.7
3,551,951	-				-0.6
3,551,951	-				-0.4
3,551,951	-				+0.3
3,551,951	-				+0.8
3,551,958	+				-3.3
3,551,959	-				+1.2
3,551,968	+				-0.5
3,552,270	+		RR42_RS36120	0.21	+0.6
3,552,271	-		RR42_RS36120	0.21	-1.1
3,552,513	+		RR42_RS36120	0.47	+0.6
3,552,513	+		RR42_RS36120	0.47	+1.3
3,552,514	-		RR42_RS36120	0.47	+1.5
3,552,514	-		RR42_RS36120	0.47	+0.3
3,552,514	-		RR42_RS36120	0.47	+0.3
3,552,696	+		RR42_RS36120	0.67	-0.3
3,552,798	+		RR42_RS36120	0.78	+1.1