Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36005

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,525,357	+		RR42_RS36000	0.26	-0.4
3,525,357	+		RR42_RS36000	0.26	-0.5
3,525,572	-		RR42_RS36000	0.48	+1.4
3,525,844	+		RR42_RS36000	0.76	+0.4
3,525,867	+		RR42_RS36000	0.78	+0.9
3,525,867	+		RR42_RS36000	0.78	+0.6
3,525,877	-		RR42_RS36000	0.79	+0.6
3,525,943	+		RR42_RS36000	0.86	-1.1
3,526,080	-				+0.3
3,526,080	-				+0.4
3,526,097	-				-0.7
3,526,225	+		RR42_RS36005	0.14	-1.4
3,526,225	+		RR42_RS36005	0.14	-1.0
3,526,225	+		RR42_RS36005	0.14	-0.5
3,526,225	+		RR42_RS36005	0.14	-1.9
3,526,226	-		RR42_RS36005	0.14	+0.9
3,526,226	-		RR42_RS36005	0.14	-0.4
3,526,226	-		RR42_RS36005	0.14	+1.2
3,526,514	+		RR42_RS36005	0.76	-0.3
3,526,623	+				+0.2
3,526,623	+				-0.6
3,526,624	-				+0.7
3,526,643	+				+0.3
3,526,712	+				-1.0
3,526,712	+				+0.1
3,526,755	-				+0.3
3,527,019	-		RR42_RS36010	0.61	-0.3
3,527,226	-				-1.3
3,527,299	+		RR42_RS36015	0.40	-2.9
3,527,300	-		RR42_RS36015	0.40	-0.3
3,527,300	-		RR42_RS36015	0.40	+0.8
3,527,300	-		RR42_RS36015	0.40	+1.4
3,527,319	+		RR42_RS36015	0.50	+0.0
3,527,319	+		RR42_RS36015	0.50	+0.6
3,527,354	+		RR42_RS36015	0.69	-0.7
3,527,396	-				-0.4
3,527,435	-				-0.3
3,527,493	+				-0.6
3,527,497	-				-1.5
3,527,524	+				-0.4
3,527,527	-				-0.3
3,527,541	+				+1.5
3,527,541	+				-2.4
3,527,541	+				-1.4
3,527,542	-				-3.1
3,527,542	-				-1.4
3,527,542	-				-2.6
3,527,542	-				+0.5
3,527,551	-				-1.6
3,527,566	+				-1.4
3,527,566	+				+0.3
3,527,567	-				+0.3
3,527,569	-				+0.3
3,527,569	-				-0.0
3,527,583	-				-0.8