Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35900

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,500,895	+				+0.4
3,500,895	+				+0.1
3,500,983	+				-2.2
3,501,033	+		RR42_RS35895	0.13	-0.9
3,501,123	+		RR42_RS35895	0.29	+0.9
3,501,123	+		RR42_RS35895	0.29	-2.8
3,501,123	+		RR42_RS35895	0.29	+0.3
3,501,123	+		RR42_RS35895	0.29	-2.0
3,501,124	-		RR42_RS35895	0.29	-1.7
3,501,124	-		RR42_RS35895	0.29	-1.8
3,501,304	-		RR42_RS35895	0.62	+1.5
3,501,418	-		RR42_RS35895	0.83	-1.0
3,501,550	+				-0.7
3,501,590	+				+0.4
3,501,697	-				+0.8
3,501,697	-				-0.0
3,501,710	+				+1.3
3,501,711	-				-1.1
3,501,734	-				-0.3
3,501,734	-				+1.5
3,501,734	-				-3.5
3,501,734	-				-0.6
3,501,747	+				-1.6
3,501,747	+				-2.0
3,501,747	+				-2.2
3,501,748	-				-3.5
3,501,922	+		RR42_RS35900	0.46	-2.2
3,501,922	+		RR42_RS35900	0.46	+1.7
3,501,922	+		RR42_RS35900	0.46	-0.8
3,501,923	-		RR42_RS35900	0.46	-0.3
3,501,923	-		RR42_RS35900	0.46	-1.2
3,501,925	+		RR42_RS35900	0.47	-2.0
3,501,925	+		RR42_RS35900	0.47	-1.4
3,501,925	+		RR42_RS35900	0.47	-2.2
3,501,926	-		RR42_RS35900	0.48	-3.2
3,501,957	+		RR42_RS35900	0.62	-1.5
3,501,957	+		RR42_RS35900	0.62	-0.9
3,501,957	+		RR42_RS35900	0.62	+0.8
3,501,957	+		RR42_RS35900	0.62	-1.8
3,501,958	-		RR42_RS35900	0.62	-1.0
3,501,958	-		RR42_RS35900	0.62	-1.1
3,501,958	-		RR42_RS35900	0.62	-1.1
3,501,958	-		RR42_RS35900	0.62	-1.4
3,501,967	+		RR42_RS35900	0.66	-1.7
3,501,967	+		RR42_RS35900	0.66	-1.8
3,501,968	-		RR42_RS35900	0.67	-0.9
3,502,028	-				+0.2
3,502,028	-				+0.3
3,502,223	+				-2.0
3,502,223	+				+2.0
3,502,224	-				+0.8
3,502,486	+		RR42_RS35905	0.20	-2.9
3,502,486	+		RR42_RS35905	0.20	-0.4
3,502,487	-		RR42_RS35905	0.20	+0.2
3,502,487	-		RR42_RS35905	0.20	-0.4
3,502,487	-		RR42_RS35905	0.20	-0.2
3,502,513	+		RR42_RS35905	0.23	-0.4
3,502,513	+		RR42_RS35905	0.23	-1.8
3,502,514	-		RR42_RS35905	0.23	-0.8
3,502,699	+		RR42_RS35905	0.41	-0.3
3,502,715	+		RR42_RS35905	0.43	+0.4
3,502,715	+		RR42_RS35905	0.43	-0.9
3,502,787	-		RR42_RS35905	0.50	+2.7
3,502,816	+		RR42_RS35905	0.53	-0.2
3,502,817	-		RR42_RS35905	0.53	-1.6
3,502,817	-		RR42_RS35905	0.53	-2.1
3,502,817	-		RR42_RS35905	0.53	-1.2
3,502,939	+		RR42_RS35905	0.65	-0.3
3,502,939	+		RR42_RS35905	0.65	-0.2
3,502,940	-		RR42_RS35905	0.65	+1.3
3,502,990	+		RR42_RS35905	0.70	-0.2
3,502,991	-		RR42_RS35905	0.70	+0.5
3,502,991	-		RR42_RS35905	0.70	-1.3
3,502,991	-		RR42_RS35905	0.70	-1.6
3,502,991	-		RR42_RS35905	0.70	+0.2
3,502,991	-		RR42_RS35905	0.70	-1.8