Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35195

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,348,303	-		RR42_RS35190	0.73	+1.0
3,348,303	-		RR42_RS35190	0.73	-1.6
3,348,303	-		RR42_RS35190	0.73	+1.2
3,348,373	+		RR42_RS35190	0.79	+2.4
3,348,373	+		RR42_RS35190	0.79	-2.1
3,348,374	-		RR42_RS35190	0.79	-0.1
3,348,374	-		RR42_RS35190	0.79	-0.8
3,348,374	-		RR42_RS35190	0.79	-0.4
3,348,374	-		RR42_RS35190	0.79	+0.5
3,348,558	+				+0.2
3,348,559	-				+0.4
3,348,585	+				-2.4
3,348,585	+				-0.3
3,348,585	+				+0.3
3,348,585	+				+1.2
3,348,585	+				-0.1
3,348,586	-				-0.5
3,348,586	-				+0.0
3,348,586	-				-1.3
3,348,586	-				-0.4
3,348,586	-				-2.8
3,348,586	-				-1.5
3,348,586	-				+0.7
3,348,586	-				+0.4
3,348,586	-				-1.4
3,348,586	-				-2.3
3,348,710	+				+0.0
3,348,710	+				-2.3
3,348,710	+				+0.4
3,348,710	+				+1.0
3,348,710	+				+0.6
3,348,711	-				-1.5
3,348,711	-				-1.3
3,348,711	-				+0.2
3,348,711	-				-0.1
3,348,711	-				-0.2
3,348,711	-				-0.0
3,348,711	-				+1.3
3,348,782	+				+0.3
3,348,782	+				-0.1
3,348,783	-				-0.3
3,348,786	-				+0.5
3,348,811	-				-2.3
3,348,829	+				+0.8
3,348,829	+				+0.3
3,348,957	-				-1.1
3,348,957	-				+0.2
3,349,011	+				-0.3
3,349,011	+				+0.6
3,349,012	-				-1.5
3,349,032	+				-1.0
3,349,033	-				-0.1
3,349,062	+				-1.9
3,349,063	-				-0.9
3,349,063	-				+0.8
3,349,063	-				+0.0
3,349,063	-				+1.0
3,349,063	-				+1.2
3,349,063	-				+0.3
3,349,071	+				-0.2
3,349,071	+				+0.0
3,349,072	-				+1.4
3,349,382	+		RR42_RS35195	0.34	-3.5
3,349,382	+		RR42_RS35195	0.34	-1.4
3,349,382	+		RR42_RS35195	0.34	-2.0
3,349,382	+		RR42_RS35195	0.34	-1.1
3,349,382	+		RR42_RS35195	0.34	+0.0
3,349,383	-		RR42_RS35195	0.34	-1.1
3,349,799	+		RR42_RS35195	0.86	-2.1
3,349,799	+		RR42_RS35195	0.86	+1.5
3,349,800	-		RR42_RS35195	0.86	+0.7
3,349,887	+				-1.7
3,350,114	+		RR42_RS35200	0.13	+0.1
3,350,220	-		RR42_RS35200	0.24	-2.1
3,350,246	+		RR42_RS35200	0.27	-0.0
3,350,246	+		RR42_RS35200	0.27	+0.5
3,350,247	-		RR42_RS35200	0.27	+1.4
3,350,285	+		RR42_RS35200	0.32	-0.7
3,350,286	-		RR42_RS35200	0.32	+1.7
3,350,613	+		RR42_RS35200	0.68	-0.9
3,350,663	-		RR42_RS35200	0.74	+2.1
3,350,826	+				-0.2
3,350,826	+				-2.5
3,350,827	-				-1.4
3,350,827	-				-0.5
3,350,827	-				-1.2